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Database: UniProt
Entry: A0A0D9YU55_9ORYZ
LinkDB: A0A0D9YU55_9ORYZ
Original site: A0A0D9YU55_9ORYZ 
ID   A0A0D9YU55_9ORYZ        Unreviewed;      1696 AA.
AC   A0A0D9YU55;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 41.
DE   RecName: Full=Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein {ECO:0000259|SMART:SM00922};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM02G22230.1};
RN   [1] {ECO:0000313|EnsemblPlants:OGLUM02G22230.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A., Panaud O., Oliveira A.C.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OGLUM02G22230.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   STRING; 40148.A0A0D9YU55; -.
DR   EnsemblPlants; OGLUM02G22230.1; OGLUM02G22230.1; OGLUM02G22230.
DR   Gramene; OGLUM02G22230.1; OGLUM02G22230.1; OGLUM02G22230.
DR   eggNOG; KOG1223; Eukaryota.
DR   eggNOG; KOG2382; Eukaryota.
DR   Proteomes; UP000026961; Unassembled WGS sequence.
DR   GO; GO:0070204; F:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity; IEA:InterPro.
DR   GO; GO:0070205; F:2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity; IEA:InterPro.
DR   GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR   GO; GO:0009234; P:menaquinone biosynthetic process; IEA:UniProtKB-KW.
DR   GO; GO:0042550; P:photosystem I stabilization; IEA:EnsemblPlants.
DR   GO; GO:0042372; P:phylloquinone biosynthetic process; IEA:EnsemblPlants.
DR   CDD; cd07037; TPP_PYR_MenD; 1.
DR   CDD; cd02009; TPP_SHCHC_synthase; 1.
DR   Gene3D; 3.40.50.970; -; 2.
DR   Gene3D; 3.40.50.1820; alpha/beta hydrolase; 1.
DR   Gene3D; 3.20.20.120; Enolase-like C-terminal domain; 1.
DR   Gene3D; 3.30.390.10; Enolase-like, N-terminal domain; 1.
DR   Gene3D; 3.40.50.1220; TPP-binding domain; 1.
DR   HAMAP; MF_01659; MenD; 1.
DR   HAMAP; MF_01660; MenH; 1.
DR   InterPro; IPR029058; AB_hydrolase.
DR   InterPro; IPR000073; AB_hydrolase_1.
DR   InterPro; IPR029035; DHS-like_NAD/FAD-binding_dom.
DR   InterPro; IPR036849; Enolase-like_C_sf.
DR   InterPro; IPR029017; Enolase-like_N.
DR   InterPro; IPR029065; Enolase_C-like.
DR   InterPro; IPR013342; Mandelate_racemase_C.
DR   InterPro; IPR004433; MenaQ_synth_MenD.
DR   InterPro; IPR032264; MenD_middle.
DR   InterPro; IPR022485; SHCHC_synthase_MenH.
DR   InterPro; IPR029061; THDP-binding.
DR   InterPro; IPR012001; Thiamin_PyroP_enz_TPP-bd_dom.
DR   InterPro; IPR011766; TPP_enzyme_TPP-bd.
DR   NCBIfam; TIGR00173; menD; 1.
DR   PANTHER; PTHR42916; 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE SYNTHASE; 1.
DR   PANTHER; PTHR42916:SF1; PROTEIN PHYLLO, CHLOROPLASTIC; 1.
DR   Pfam; PF00561; Abhydrolase_1; 1.
DR   Pfam; PF13378; MR_MLE_C; 1.
DR   Pfam; PF02775; TPP_enzyme_C; 1.
DR   Pfam; PF16582; TPP_enzyme_M_2; 1.
DR   Pfam; PF02776; TPP_enzyme_N; 1.
DR   SMART; SM00922; MR_MLE; 1.
DR   SUPFAM; SSF53474; alpha/beta-Hydrolases; 1.
DR   SUPFAM; SSF52467; DHS-like NAD/FAD-binding domain; 1.
DR   SUPFAM; SSF51604; Enolase C-terminal domain-like; 1.
DR   SUPFAM; SSF54826; Enolase N-terminal domain-like; 1.
DR   SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE   3: Inferred from homology;
KW   Lyase {ECO:0000256|ARBA:ARBA00023239};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Manganese {ECO:0000256|ARBA:ARBA00023211};
KW   Menaquinone biosynthesis {ECO:0000256|ARBA:ARBA00022428};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          1155..1240
FT                   /note="Mandelate racemase/muconate lactonizing enzyme C-
FT                   terminal"
FT                   /evidence="ECO:0000259|SMART:SM00922"
FT   REGION          16..38
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        19..38
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1696 AA;  187528 MW;  AE9B1C9651659E10 CRC64;
     MLAVVSSSGH RLLPLPVLPG TFTTPPPPPP PPLLSPRRPL LAPRRRRCLC GGGGGGLLLL
     RAVAARRAGI VIDVDEVGEV GDRDLPVDVS FTRRLPPVLT LGDGLAALRR AGEEVKACPP
     AAAASGVIRF EVLVPPSTKA LKWLCTQFKR SSLFPQFYLS RKQTTDSSIQ LEISGAGSAI
     CFHGSSRLDN GFDLISRYLS FNSHLIRAYG SVGVKYDKEL LSLEERIGSF YFFIPQVELS
     EFDGYSMLSS TIVWDDSVSH TFEDSVCLFE SCFSQIWSSY DSSATICYEN MVTSYIGESR
     MSESRNTQLV YLDAEFLAVI DGKAVTEKEN CPTSDQSFVR FSPQFLFCAN MDLCLQSNKI
     ESFIRRCSNI NLAWASFIVE EFVRLGFTYF CIAPGSRSSP LALSASVHPL TTCISCYDER
     SLGFHALGYG RGSRKPAIVI TSSGTAVSNL LPSVVEASQD FVPLILLTAD RPPELQDVGA
     NQAINQVNHF GSFVRHFFSL PPPDDHIYAR TVLTTVDSAA YYAMQAPQGP VHINCAFREP
     LDYGYQDWSV DCLKGLDKWF INREPYTRYL GMKIVSALVM EVLEIVKNAN QGLLLVGAIH
     TEDDIWAVTL LARHLSWPIA ADVLSGLRMR KVQKSIPGLD KSICFIDHID QILLSESVKI
     WKTPDVIVQI GSRITSKRVG TYLESCSPSS YILIDAHPCR HDPSHVVTHR IQATITEFAA
     SLCQCNFQTK TSSWSDILMV LNSAVSQEIM FQVHSECSLT EPYVAHVIGE ALYGNATMFI
     GNSMVIRDLD MFGKGWIDHS TNANNAMMHH FPGFLGAPVA GNRGASGIDG LLSTSIGFAI
     GSNKHVFCVI GDISFLHDTN GLSLLNQRTQ RKPMTVIVIN NHGGAIFSLL PVAKTASLQI
     LEKIFYTLHD ISISKLCAAH RIKHILVQTK AELHDALVKS HEGHVDCVVE VENRIVDNAN
     FHRIISMFTD HTATMHLAYL LGGPYCKDGV NGFSVGRIHA AEYMFYRIQL AAPRTSGISE
     SSFFHEGFIL KLCVGDSIVG FGEVAPIEIH EEDLLDVEEQ LRFLFHRMKD AELDVVPLLR
     GSFSNWIWTT LGIPPSSVFP SVKCGLEMAI LNLLESQRID RSYGIFTGSN AVEYNQSSTA
     SIQICALVDS CGTPMDVTLA VVKLVAEGFT TVKLKVGRRE NPAEDAAVIQ KVREIVGYKI
     NIRADANRKW TYEQAIDFGS REPVDSVNDI IKFCENSGLP VALDETIDNL TGDVIPKLHQ
     FSHPGIVALV IKPSVVGGFE TAAYIAKWAH MHDKMAVISS TYESSVGLAT YIQFAHYVDR
     QNDITSRIKN KGSCGNVAHG LGTYQWLRED VSDQKLKIHA PPLGDGIRAS AEDAHGYLQH
     LVINDKKIER TYSEEKLRSY FIQVDGDNFS YQVKLQEGGD CTHEKVILFL HGFLGTSEDW
     VPMMKALSPS ARVIAVDLPG HGESEILQHD VENSNQISFS VQSVADLLLK LIRNITDGAV
     VVVGYSMGAR IALHMALNQN HKISGAVIIS GSPGLRDEAS KRRRSAIDRS RAHFLSSCGL
     ENFLETWYSA KMWASLREHP KFDSLVRTRM KHNNIKALSK VLADSSTGTQ KSLWEDLKHL
     KSPLLIVAGE KDPKFKEISQ QMCREIRKHK DRESDGLCEM IIIPDSGHAV HVENPLPLVR
     AIRKFLVRDI PDVISK
//
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