ID A0A0E0B4S8_9ORYZ Unreviewed; 471 AA.
AC A0A0E0B4S8;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=MBD domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM09G15680.2};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM09G15680.2}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM09G15680.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A0E0B4S8; -.
DR STRING; 40148.A0A0E0B4S8; -.
DR EnsemblPlants; OGLUM09G15680.2; OGLUM09G15680.2; OGLUM09G15680.
DR Gramene; OGLUM09G15680.2; OGLUM09G15680.2; OGLUM09G15680.
DR eggNOG; KOG4161; Eukaryota.
DR HOGENOM; CLU_061068_1_0_1; -.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd01396; MeCP2_MBD; 1.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR InterPro; IPR011124; Znf_CW.
DR PANTHER; PTHR12396:SF0; METHYL-CPG BINDING DOMAIN PROTEIN-LIKE, ISOFORM C; 1.
DR PANTHER; PTHR12396; METHYL-CPG BINDING PROTEIN, MBD; 1.
DR Pfam; PF01429; MBD; 1.
DR Pfam; PF07496; zf-CW; 1.
DR SMART; SM00391; MBD; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 1.
DR PROSITE; PS50982; MBD; 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 229..288
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT DOMAIN 294..368
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT REGION 87..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 152..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 402..471
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 99..113
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 155..171
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..462
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 471 AA; 52077 MW; FF32CC2F31FB4F9A CRC64;
MEAERSRPYG PTAKDRIDET TPVCATHLSR LGPVNYIFAR SRRELRPPFA PLLYRCCQAH
HRKSRPPCSF SSSSSWCDPA PSDLRRAGVA GGGGPRLAAR TPPHPPPQTS SAPAEPLPLF
VRRRCLEDSL GVDSSRGEGA AAVVVVCPAA SAASPPMGNS KTPQPSKKSR IMLSDTDGHQ
LDNDEFSSES ASNQMVLFNP ETVAKGQDEL GENHSPSLQK SANYPNRGMP SIGAFTVQCA
KCFKWRLIPT KEKYEEIREC IIQEPFECER AREWRPDVTC NDPEDISQDG SRLWAIDKPN
IALPPPGWER QIRIRGEGGT KFADVYYTSP TGRKLRSLVE IDRYLLENPD YVAQGVTLTQ
FSFQIPRPLR QDYVKKRPKI VNPNDEASVV TTKSVKPEEV SPIAWAAPSV HQEGEAGERA
SHADEPPEAE ELELTRKRKA ESPLFEEAHS NHVSDEPKTK LEDTQNGGPS A
//