ID A0A0E0BFB3_9ORYZ Unreviewed; 1884 AA.
AC A0A0E0BFB3;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM11G02760.1};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM11G02760.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM11G02760.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR STRING; 40148.A0A0E0BFB3; -.
DR EnsemblPlants; OGLUM11G02760.1; OGLUM11G02760.1; OGLUM11G02760.
DR Gramene; OGLUM11G02760.1; OGLUM11G02760.1; OGLUM11G02760.
DR eggNOG; KOG1473; Eukaryota.
DR HOGENOM; CLU_002742_1_0_1; -.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15532; PHD2_CHD_II; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR047365; Tudor_AtPTM-like.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46508; PHD FINGER FAMILY PROTEIN; 1.
DR PANTHER; PTHR46508:SF1; PHD FINGER FAMILY PROTEIN; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF21743; PTM_DIR17_Tudor; 1.
DR Pfam; PF15612; WHIM1; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 330..390
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 544..591
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 257..306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 522..542
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1064..1103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1472..1498
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1603..1622
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 278..305
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1884 AA; 206094 MW; 2B2C077C207D9A79 CRC64;
MEVSDRMLHA SPAAAAAAPA TADDARETEI AGGIASASAA VEDPPASAPP ASEAAGEGVI
AVEHERAAAH PVSETKMDVD EVGTADAEQA VAPAAGEVKA EVNGGSIPDK EQDAAACTPT
QVKTEVYENG VQEQVHTVAA VASEVKMEGC EGGVVDQKPT TTPADGCQMK EEGECLVGRY
ISRSVAGHGR ILLGKVASYD GSTGIYSVVF EDGQGEDLEL AQLQSQLVGE ENGAFGMKVS
CRKRKLDLLV SSGGATEVKG PPITRQRVNE SEVSTRPDES QESGSGSDAS EDVESSSNSS
NCTKELPVEH YPPVQVLELP PSSGDIAVPE EAISYLFSVY NFLRSFSVQL FLSPFGLDDF
VSSVNCTTQN TLLDAVHVSL LRALRRHLET KSSEGLKLAS NCLKYLDWTL LDSLTWPAFL
LEYLYVMGII KDLGGRRFGR SVLAIEYYKL PVTLKLRILQ LLCDHVIDSE ELKTELEERE
GYSEEMEYEM DSSTFAEVGS RSVLTRGSKA SACKKLDALQ NLETAPNGNN PESASTHASQ
DGNSDDCRIC GMDGTLVCCD GCPWAYHSRC IGQNKAFLPQ GDWFCPECVV NKLGPTSSRI
ERGARGAQLF GIDMCGRSFL GCCNYLLVIG TSSDVEFCAR YYNHCDVVKV VQILASSDAY
TDICRRMTEY WSHLLDIFQN ERSKISKEVG GSLMSQSNIL STATPVKANN GSVQATLKDG
QDSKMAVLSQ INAHQVMDNQ FTLCSANNNE AFRQTPLAKT YVDNAYRNGA FGPSGTSSIS
HQSTSMVTVM PNRTQAQPAH GLIRPDLSCG SVIGNGMSRE NIRSSISARA DLISPPYKSK
PPVQLITENM SGGKPAKFSS FRPQAYMNLY NHGNVAASAA ANLAILKSDE GKAPTSHLTT
NQRKKLAADC ALQVKAFSSA ALQFVWPSTE KKVMEVPRDR CGWCLACQSS AGGTKKACFL
NMATANASKG SARILSGMRL IKNSDSHFPS IVTYLSHMEE SLRGLLVGSL QDVQRRQQWY
NQLKDASNCG NIIPLLLELE SNIRGVAFST SWLKLIDDWP VESPSASAGA SRPAAYQKRG
TGGRRGRKRS MASESAPVTD DDNSWKEVNW WSGGNVSKRI LQRGALPILT IRKAARQGGK
KRMFSVSYHE GSNFPRRTRQ LAWRACVGLS QSSSQLALQV RYLDAHIRWK EFIPPDQIPS
EGKSVDSDYS VLRNAVVCDK KIVDNKIRYA LKFPNQKHLP VRVTKNILEA EDNQDGDGKF
WFSENHIPLY LLREFEQKAG VSSLPTPGML DSNCFANFYQ RRVKSSIGDV FFYLLHKGDV
YPCTSCKKDV SFRDIIKCSS CQGNCHKECT LRSVGSKEGN AASSLTCKLC LQKRSLMLTN
YNTNASFILP QQKSNVHHAV AAPKIIFKVG SSHSAEPATK VEAPPIVKAE AQPVVKKETW
PVVKMETQPT ANVEAQPTAK VEAFPISNLA TQNNAGAQVQ PKTKSKKPKP EKPRKSKKTE
EIKYFGLVWK KSTNDKNNNE NSGEVFRAND VILKGKDGVG SSIKPTCCLC NKPYCPDFLY
VRCERCKKWF HGDALQLEEE KIFELVSYRC CRCRRRAIPK CPHSDDYKKP EPEYSEQTVA
TSSQSTMLSS EENFAVADQD PLLASYGRVE PFGAQTMDAD LSMNMMSFNP GNQKLSVRRG
QNKNCEYVDQ SSIHVDDYYI QNQPQGNANI NFSHSNEFSL SEADGVDASE LLGWDFSQGN
TSAAPSDFAA NCPWNDISCG SVAGDEYEPQ TYFSFTELLE ADDTQFDNTF GMSNSVQDDG
DQQGIGFDEM AFMMEDGASN MPFPAIDSAS DEVACDRCKN PQPPPDLKCA VCGLQMHRHC
SPWEDGEQPS DSADWSCGAC REWR
//