ID A0A0E0BKF3_9ORYZ Unreviewed; 1125 AA.
AC A0A0E0BKF3;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Replication factor C subunit 1 {ECO:0000256|ARBA:ARBA00020401, ECO:0000256|PIRNR:PIRNR036578};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM11G17000.1};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM11G17000.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM11G17000.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- FUNCTION: May be involved in DNA replication and thus regulate cell
CC proliferation. {ECO:0000256|ARBA:ARBA00002386}.
CC -!- SUBUNIT: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can
CC form a complex with RFC1. {ECO:0000256|ARBA:ARBA00011480}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PIRNR:PIRNR036578}.
CC -!- SIMILARITY: Belongs to the activator 1 large subunit family.
CC {ECO:0000256|ARBA:ARBA00006116, ECO:0000256|PIRNR:PIRNR036578}.
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DR AlphaFoldDB; A0A0E0BKF3; -.
DR STRING; 40148.A0A0E0BKF3; -.
DR EnsemblPlants; OGLUM11G17000.1; OGLUM11G17000.1; OGLUM11G17000.
DR Gramene; OGLUM11G17000.1; OGLUM11G17000.1; OGLUM11G17000.
DR eggNOG; KOG1968; Eukaryota.
DR HOGENOM; CLU_003574_4_0_1; -.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003689; F:DNA clamp loader activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0051570; P:regulation of histone H3-K9 methylation; IEA:EnsemblPlants.
DR GO; GO:0000712; P:resolution of meiotic recombination intermediates; IEA:EnsemblPlants.
DR CDD; cd00009; AAA; 1.
DR CDD; cd17752; BRCT_RFC1; 1.
DR CDD; cd18140; HLD_clamp_RFC; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.20.272.10; -; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR013725; DNA_replication_fac_RFC1_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR012178; RFC1.
DR InterPro; IPR047854; RFC_lid.
DR PANTHER; PTHR23389; CHROMOSOME TRANSMISSION FIDELITY FACTOR 18; 1.
DR PANTHER; PTHR23389:SF6; REPLICATION FACTOR C SUBUNIT 1; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF00533; BRCT; 1.
DR Pfam; PF08519; RFC1; 1.
DR PIRSF; PIRSF036578; RFC1; 2.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; BRCT domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF48019; post-AAA+ oligomerization domain-like; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PIRNR:PIRNR036578};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705,
KW ECO:0000256|PIRNR:PIRNR036578};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|PIRNR:PIRNR036578}; Nucleus {ECO:0000256|PIRNR:PIRNR036578};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961}.
FT DOMAIN 397..478
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT REGION 1..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 79..399
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 479..531
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1039..1125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 88..102
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 194..216
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..249
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 287..307
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 381..396
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 483..497
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 515..531
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1046..1061
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1063..1085
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1125 AA; 121831 MW; 172B63109A72DEDD CRC64;
MSQTFVPRAD QKKKKLCATH ASTDPSSPLS PGLPPAAPAH LAKIARRFPS FFPQTRDPSP
LPKHTPAAAR LLLLLLFPPH PVVTPTRKRP KKRGEGGGRE GGRKQGPARS LPPPTLNPRP
PSLYPLTGRA RVWGPGRSGS SEMSSDIRKW FMKAQDKNGG AAKPAGPAAK KPVLSIPEKP
SAAPSMAACD QDCSARRKTS KYFASKTEKE EDTSAGKGTG RGLPKRKLQK VSDELEDDMK
PLPAKEVHKE EEDDDDDDFV APSKRKTPVK PPPSKKLKGA STAEAHGKTG LDDDNEDKMD
EDAKTPSKAS GSGRGRGRGR GRGGRGAGAA HGKTIGLDDD GEEDKMDEDA KTPSKAAGRG
RGGASGGRGR GGGGRGFMNF GERKDPPHKG EKEVPEGAPD CLTGLTFVIS GTLDSLEREE
ATDLIKRYGG RVTGSISKKT NYLLADEDVG GVKSNKAKEL GVPFLTEDGL FDMIRKSKPA
KATVAKHQSD KNSEKQQKSP MKSSPVKVER RDGNQITTGK NISPKSNKGS ASIDNQKVKI
VDRGSLQWTE KYRPKVPNDI VGNQSMVKQL HDWLKSWEDQ FLHSGQKGKG KKQADNGAKK
AVLLSGPPGI GKTTTAKVVS QMLGLQAIEV NASDSRGKAD SKIEKGVGGS TSNSIKELIS
NATLNYSNNR LKRPKAVLVM DEVDGMSAGD RGGVADLIAS IKMSKIPIIC ICNDRYSQKL
KSLVNYCLLL NFRKPTKQQM GKRLMEIAKK EGLQAQENAM EELAERVHGD IRMALNHLQY
MSLSQSVVKY DDIRQRLNSS TKDEDISPFT AVDKLFGFNG GRLRMDERID LSMSDPDLVP
LIVQENYINY RPITVGKDDS GVKRMNFLAR AAESIADADI VNGERNFNRF GGWLGKYSTT
NKNIRLLEDA HSHILASQQA NLDRESLRLD YLTLLLRQLT DPLKTMPKDE AVQKVVEFMD
TYSLSQEDFD TIVELSKFKG HPNPMDGIQP AVKSALTKAY KQGSSSRVVR AADLVNIPGM
KKPLKKRVAA ILEPVGESLP EENGVASAEG DEEDSSDAEN NDELVPGDTK PKLDLQSDKK
KGIQVQLDLK SNGNGLNSKK MPAGRSKASG SAGKAAGGSG GKRKR
//
