ID A0A0E0JZQ6_ORYPU Unreviewed; 457 AA.
AC A0A0E0JZQ6;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE RecName: Full=HMG box domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza punctata (Red rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4537 {ECO:0000313|EnsemblPlants:OPUNC02G14620.1};
RN [1] {ECO:0000313|EnsemblPlants:OPUNC02G14620.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OPUNC02G14620.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0E0JZQ6; -.
DR STRING; 4537.A0A0E0JZQ6; -.
DR EnsemblPlants; OPUNC02G14620.1; OPUNC02G14620.1; OPUNC02G14620.
DR Gramene; OPUNC02G14620.1; OPUNC02G14620.1; OPUNC02G14620.
DR eggNOG; KOG0381; Eukaryota.
DR eggNOG; KOG2744; Eukaryota.
DR HOGENOM; CLU_035371_1_0_1; -.
DR OMA; VKSDNRW; -.
DR Proteomes; UP000026962; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd16872; ARID_HMGB9-like; 1.
DR CDD; cd22009; HMG-box_AtHMGB9-like; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR045303; ARID_HMGB9-like.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR46691:SF3; HIGH MOBILITY GROUP B PROTEIN 15; 1.
DR PANTHER; PTHR46691; HIGH MOBILITY GROUP B PROTEIN 9; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000026962}.
FT DOMAIN 65..156
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 275..342
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 275..342
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 381..457
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..34
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 381..397
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..415
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 430..457
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 457 AA; 50676 MW; ECA4BBD0AD61BDF5 CRC64;
MSAPASAAAE EEGVEAGKKG VADAKGKGKE KVVAEDSAAG SGGSGGGRRT LVAYPARVAG
YKDVVADAAV FRAALEGLHA QMGTKLKVPI IGGKDLDLHQ LFKEVTSRGG IDKVKSDNRW
REVTASFIFP ATATNASFML KKYYMSLLYH FERLYLFEAQ GWYQETDSRS ISCTEMKAEG
QASRKRKRGS NSCSSDLAAS LDNDVHVIID GKFEHGYIVT VIMGSKSTKA VLYNCTEEPA
VPTAVPRVAT DIPEGIRPRR RRRRKKLSTT DPNHPKPNRS GYNFFFQDQH RKLKPEYPGQ
DRLISKMIGE RWNNLSPEDK AVYQEKGVED KARYQRQLAL YREQRTGQPI SNAVPIQQRL
PQKEVTIDEV DSKVSEGDIL LSNQGYSSSS SSSDETADSG EKNVEDDEEF DTETSPEPSM
ETTDSHGQPD PSADGERFEL RRRENPNIDE KRDMPPN
//
