ID   A0A0E0LL81_ORYPU        Unreviewed;       982 AA.
AC   A0A0E0LL81;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   RecName: Full=HRDC domain-containing protein {ECO:0000259|PROSITE:PS50967};
OS   Oryza punctata (Red rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4537 {ECO:0000313|EnsemblPlants:OPUNC07G14830.1};
RN   [1] {ECO:0000313|EnsemblPlants:OPUNC07G14830.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OPUNC07G14830.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0E0LL81; -.
DR   STRING; 4537.A0A0E0LL81; -.
DR   EnsemblPlants; OPUNC07G14830.1; OPUNC07G14830.1; OPUNC07G14830.
DR   Gramene; OPUNC07G14830.1; OPUNC07G14830.1; OPUNC07G14830.
DR   eggNOG; KOG2206; Eukaryota.
DR   eggNOG; KOG4373; Eukaryota.
DR   OMA; CSAILET; -.
DR   Proteomes; UP000026962; Chromosome 7.
DR   GO; GO:0005737; C:cytoplasm; IEA:EnsemblPlants.
DR   GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR   Gene3D; 1.10.150.80; HRDC domain; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR045092; Rrp6-like.
DR   PANTHER; PTHR12124; POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; 1.
DR   PANTHER; PTHR12124:SF68; PROTEIN RRP6-LIKE 3; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026962}.
FT   DOMAIN          348..435
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
FT   REGION          1..47
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          61..88
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          729..830
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          843..873
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        9..26
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        30..47
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        736..766
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        774..830
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        857..871
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   982 AA;  110612 MW;  EAF71C935B841A31 CRC64;
     MGRIVDSSSP KTVKPSHLSL SSPVANPSHP RPCEEEEKPQ DRFRRVLADN SYSHFKHLRR
     QGAEPVGSGH HGREAQPLPP QESSQKVHPF EEEITSLLNN PLGFQNFMPG GQCPEMSTSY
     NWIKTDAQLE DLARLLDDEK VFSVDTEQHS LRSFLGYTAL MQISTQKADY LIDTIALHDV
     MSILRPVFAN PSICKIFHGA DNDVLWLQRD FHIYVVNMFD TAKACEVLSK PQKSLAYLLE
     LYCGVITDKT MQREDWRLRP LTPEMIQYAR CDAHYLLYIA NCLASELHAK TYDSPNDKIN
     FFFEASHRSN MVCMQLYTKE IECPPGASSA ASIFSKNLQS HGLDPYKSSE VKDLVWKICA
     WRDLMARMHD ESLRYVLSDQ TIASLAISVP RGPTEMCSAI LETETSNSTM YPSMPSPSPI
     VVAHFEELRY LIEDSTVSMD AIFKNLLEKY KDPSGLCRLS VFNYNLVSQL SLKQKNMFSF
     ASSGEKLLMA PPNKKASREL FIKKFSCKSP VYHNCRIYAS DGRLLCYCDR KKYIQRNLAK
     LIEDDPPAIM LLFEPKGRPE DEDNDFYIQS KKNICVGCGE KSHYIRYRII PSCYRMHFPE
     HLKSHRSHDI VLLCVDCHEI AHSAAEKYKR QIAKEFRVPL FVQKIVNSGD ISLIAGASLS
     EDKSNGTGVS PLQLRTAAMA LLRHGSSMPL KRCEELMQIV KSYYGGRDVT PEDLEMALLV
     GMSPNERRRL SKKKGFSYRS QAQNVIRKSN SSSIVENNQH DSENGYALPE QFSKDGAESN
     SQPDIDENNS QLDIDDSTSQ LGSRSNNHPH DPNPSQESTS YPLSTDDPIS ASNMEANIVQ
     QASIGGNPAN GDLDRDPCGS DNSNQAIPQN GDKKISLLGH GHHGKQVVEL LLNNGGEEAI
     NHFCQRWRQV FVESVHPRYL PSGWNIKHSG RRDFGDFSVY KPSKNAPAAD QPEALAAAVT
     DDVLLQIRQD ARIFSEQSQP IL
//