ID A0A0E0LNH4_ORYPU Unreviewed; 1791 AA.
AC A0A0E0LNH4;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 49.
DE RecName: Full=RBR-type E3 ubiquitin transferase {ECO:0008006|Google:ProtNLM};
OS Oryza punctata (Red rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4537 {ECO:0000313|EnsemblPlants:OPUNC07G21210.1};
RN [1] {ECO:0000313|EnsemblPlants:OPUNC07G21210.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OPUNC07G21210.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR STRING; 4537.A0A0E0LNH4; -.
DR EnsemblPlants; OPUNC07G21210.1; OPUNC07G21210.1; OPUNC07G21210.
DR Gramene; OPUNC07G21210.1; OPUNC07G21210.1; OPUNC07G21210.
DR eggNOG; KOG0922; Eukaryota.
DR eggNOG; KOG1812; Eukaryota.
DR OMA; HDGFPLC; -.
DR Proteomes; UP000026962; Chromosome 7.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd20335; BRcat_RBR; 1.
DR CDD; cd17917; DEXHc_RHA-like; 1.
DR CDD; cd22585; Rcat_RBR_DEAH12-like; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1750; -; 1.
DR Gene3D; 1.10.10.2130; DEAH helicase family, winged-helix domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR042035; DEAH_win-hel_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR002867; IBR_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR044066; TRIAD_supradom.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF81; ATP-DEPENDENT RNA HELICASE DEAH11, CHLOROPLASTIC-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF01485; IBR; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00647; IBR; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF57850; RING/U-box; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51873; TRIAD; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000026962};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 1741..1762
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 276..440
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 479..645
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 1523..1736
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51873"
FT DOMAIN 1527..1569
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 185..212
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1791 AA; 200944 MW; 15699FEBDD196ADE CRC64;
MRRSNDGRPF RPPDWGPPPP RHRYHHHQLY HQNQYQQRYR PAQPAPRQFA VILLRGGSNL
STPPAREVEA LVAGLPSHPP DNLNVSSSGR QAARLMFRSL QAAAAAAREL WSLRLEGLHL
LTPDVSDPAL AAHAAPLIAS LFAAHATRLI DSDLVSLTAA HSSELAASIQ AVKRRLARHN
RIRDFEQLQA QKRTLEAEKD LVDAKIDEYK AAMRSIRHAL LRGMEDDEEG EEEGLEVFGI
GGGGEMNFAR LHMIMMRECR RLKEGLPIYA YRRNILDHIF ANQVMILIGE TGSGKSTQLV
QYLADSGLAA NGSIICTQPR KIAAMSLAHR VNEESNGCYG NNFVLSYSAF LDYHDFSSKI
IYTTDNCLLH HCINDMGLDG ISYVIVDEAH ERSLNTDLLL ALIKKKLLDR LDLRLIIMSA
TADANRLAEY FYGCQTFHVK GRSFPVEIKY VPDISEEASF NTVPNHLRGS CATASYVYDV
VRMVSIIHKN EEEGAILAFL TSQLEVEWAC ENFSDADAVV LPMHGKLSHV EQSLVFKSYP
GKRKIIFCTN IAETSLTIKE VKYVVDSGLA KESRFVPSSG LNVLKVNWIS QSSANQRAGR
AGRTGAGRCY RLYTESDFSM MEVHQEPEIR KVHLGTAVLR ILALGIRDAQ NFEFVDAPNP
EAINMAVKNL EQLGAVKYKC DGFELTDTGC HLVKLGIEPR LGKIMLDCFG LGLRKEGVVL
AAVMANSSSI FCRVGTDEEK YKADRLKVPF CHQDGDLFTL LAVYKEWEDE HENRNAWCWQ
NSINAKTMRR CQETISDLEN CLRHELNIIV TSYWCWNPEE STVHDKLLKR IILTSLSGNL
AMFSGHERFG YQVISTDQAV KLHPSCSLLI YDSKPEWVVF TEILSVPNQY LVCVTAVDPD
ALCTIHSMPF IQRLEKHKLQ VKVISGLGNN LLRRFCGKSG QNQQKIISLL QEEFRDDRVT
VEVDFRNKEV VLFAKEQDIE KVFGIVNDAL ECEARMLRNE CLEKSLFPGK PGDCSLALFG
SGAEIKHLEL EKRYLTVEVL HQNAHDLNDK ELICLVDTLI SGVANFYKLH GNLQVASDET
KWGKFTFLNP EYAEDAVSKL NGMEFHGSPL KVVPVCSNNR GLPFPAVRVK VSWPLKQSRG
LALVTCANGE AESVVKDCFA LGVGGRYINC EVSKRHENCI FVRGIPMHVT EPELYDAFCS
TTTRKIIDVH LLRGTPIAAP SASLCAEALN REISSFMPKK NFPAQNFRVE VFPPEENDSV
MRATITFDGS LHREAARALE HLQGSVLLCC LPWQTIQCQH VFHSTVSCPV RVYNVISQAV
ASLLESFRSQ KGVSYNLEKN EYGIFRVKLT ANATKTIADL RRPLEILMKG KTINHPDLTL
STVQLLMSRD GVADLKSVEQ ETGTYILYDR QSLNIKVFGL QDQVVAAEEK LAHALLQLRD
KKPLDIRLRG RNLPPNLMKE ILKKFGANLE GLKRELPAVE LRLNLRQHAL YVRGSKEDKQ
RVEEMISELV NSTKYNGLLQ LPLENSCPIC LCEVEDPFKL ESCGHVFCLT CLVDQCESAM
KSHDGFPLCC LKNGCKKQLL LVDLRSLLST EKLEELFRAS LRAFVASNAG KYRFCPTPDC
PSIYQVAAAD AESKPFVCGA CFVEICNKCH LEYHPFISCE AYKEYKEDPD ATLLEWRKGK
ENVKVCPSCH FTIEKADGCN HVECKCGSHI CWACLENFRS SDECYSHLRS TCLNKLLPMR
LFLHHIIILL SSWAGVLALA WANGDNEETA GERTALRWSG TQATRVGGGD Q
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