ID   A0A0E0MSN5_ORYRU        Unreviewed;      1165 AA.
AC   A0A0E0MSN5;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 32.
DE   RecName: Full=RNA-dependent RNA polymerase {ECO:0000256|RuleBase:RU363098};
DE            EC=2.7.7.48 {ECO:0000256|RuleBase:RU363098};
OS   Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI01G06820.1, ECO:0000313|Proteomes:UP000008022};
RN   [1] {ECO:0000313|Proteomes:UP000008022}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA   Zhao Q.;
RL   Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ORUFI01G06820.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- FUNCTION: Probably involved in the RNA silencing pathway and required
CC       for the generation of small interfering RNAs (siRNAs).
CC       {ECO:0000256|RuleBase:RU363098}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.48; Evidence={ECO:0000256|ARBA:ARBA00024517,
CC         ECO:0000256|RuleBase:RU363098};
CC   -!- SIMILARITY: Belongs to the RdRP family. {ECO:0000256|ARBA:ARBA00005762,
CC       ECO:0000256|RuleBase:RU363098}.
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DR   AlphaFoldDB; A0A0E0MSN5; -.
DR   STRING; 4529.A0A0E0MSN5; -.
DR   EnsemblPlants; ORUFI01G06820.1; ORUFI01G06820.1; ORUFI01G06820.
DR   Gramene; ORUFI01G06820.1; ORUFI01G06820.1; ORUFI01G06820.
DR   eggNOG; KOG0988; Eukaryota.
DR   HOGENOM; CLU_008367_0_1_1; -.
DR   OMA; DSPIQPM; -.
DR   Proteomes; UP000008022; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:UniProtKB-KW.
DR   InterPro; IPR007855; RNA-dep_RNA_pol_euk-typ.
DR   PANTHER; PTHR23079; RNA-DEPENDENT RNA POLYMERASE; 1.
DR   PANTHER; PTHR23079:SF55; RNA-DIRECTED RNA POLYMERASE; 1.
DR   Pfam; PF05183; RdRP; 1.
PE   3: Inferred from homology;
KW   Nucleotidyltransferase {ECO:0000256|RuleBase:RU363098};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008022};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU363098};
KW   RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484,
KW   ECO:0000256|RuleBase:RU363098};
KW   RNA-mediated gene silencing {ECO:0000256|RuleBase:RU363098};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU363098}.
SQ   SEQUENCE   1165 AA;  131557 MW;  F277AEB03CCBA8A5 CRC64;
     MYNPIGSAEA REPAELPAAV AAELERLEGR LRQLAGAEAR RHLAVLGEAG AARVLRAVAE
     SRRVRTLPGF IKYLAKREAA ITRRDARGVP TALSAPAFIS GPSREAHTVT QYLGNVSSGS
     HALARNHKVI HYIDSPARAM APAVPNDVMM QVGSPCRCMP SGLQNYIEID SPIQPMISTP
     RRVSTPSSVQ DISRLIENMA GPSVSPPSPI TAMPQNPTTT CHTTDNALRE AASPQMLALE
     ELGFRKIFMV FAYLASEKIE NVLSVDYIRS LKFLSMAQFE SQIWRTFGHK YIAASDRAKN
     LDSDPGMTKV YHCNVAIRGD TVVKIFKGPY IENTRTHLQK VVGDDNVLVV KFMGKLSDTK
     TDFSTYCEHY HKVAEDGIVL GLRRYRFFVY KDGGKEEKLK QEKIEDKNKC TSPVMCYFVR
     TESGWNMDEP YILSGRTVGQ ARELFMHISS APTLAKYMAR FALILSKTIT WDADLSAVYV
     RRIKDEPCMD RHGNVVHKDQ EPLIHTDGTG LVSVDLALNC PTSIFKGKFL KPQGIATCDE
     SETVMRPNSL KRHRSLTAEH PLLMQFRLFY NGSAVKGTVL VDRRLPPATI LIRPSMVKIE
     THPELSGVRS VNSSEIVSAR NAKKSLSGVQ SVNSFEIVST SNRPRRTLTS RFLITLLCYG
     GVPEEYFLEL LQSAIEGAEN ACYDYEDALR IAFSYADMED SMSACMILSG IPLEESYLQH
     RLDFMAQQER KGIKQGKIPI DECYYLMDTT DPTGTLRPNE VCVILENGQF SGDVLVYKHP
     GLHFGDIHVL KATYIRDLEK EYVGYAKYAI LFPISGPRSL ADEMANSDFD GDIYWVSKNP
     KLLEHFKPSE PWVQAIKPKK TKQKKPQDCN ESKLERLLFH EFLKTRFTPS FALGTAADSW
     LAYMDRLLTD SLDEIEKKLI EEKMLKLVDL YYLALDAPKT GNKVNIPSDL MVKQYPHFMG
     RSFSYHSSSI LGQIYDKAED VESLRSCNVQ PIGVSLLPCF MEREAPPAAR HLWQHRYEEY
     LTDSTMLYRA MVDKEERNMK FQELYEKYKH MLYDASEFEQ TQRDPDDVFS EACVIYQIVY
     EKARWSNDAS RCGFAWKVAG RALCHFYALK NEGDTALCSL PLLRKIIKKD HRSVQCDNGH
     KYASLLVCKM DSMDSVWYEV ISVGN
//