ID   A0A0E0MSQ3_ORYRU        Unreviewed;       843 AA.
AC   A0A0E0MSQ3;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   13-SEP-2023, entry version 35.
DE   RecName: Full=HD-ZIP protein HOX29 {ECO:0008006|Google:ProtNLM};
OS   Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI01G06940.1, ECO:0000313|Proteomes:UP000008022};
RN   [1] {ECO:0000313|Proteomes:UP000008022}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA   Zhao Q.;
RL   Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ORUFI01G06940.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC   -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class III subfamily.
CC       {ECO:0000256|ARBA:ARBA00010338}.
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DR   AlphaFoldDB; A0A0E0MSQ3; -.
DR   EnsemblPlants; ORUFI01G06940.1; ORUFI01G06940.1; ORUFI01G06940.
DR   Gramene; ORUFI01G06940.1; ORUFI01G06940.1; ORUFI01G06940.
DR   Proteomes; UP000008022; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR   CDD; cd14686; bZIP; 1.
DR   CDD; cd00086; homeodomain; 1.
DR   Gene3D; 3.30.530.20; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR044830; HD-Zip_III.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR013978; MEKHLA.
DR   InterPro; IPR023393; START-like_dom_sf.
DR   InterPro; IPR002913; START_lipid-bd_dom.
DR   PANTHER; PTHR45950; HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14; 1.
DR   PANTHER; PTHR45950:SF1; HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-15; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   Pfam; PF08670; MEKHLA; 1.
DR   Pfam; PF01852; START; 1.
DR   SMART; SM00389; HOX; 1.
DR   SMART; SM00234; START; 1.
DR   SUPFAM; SSF55961; Bet v1-like; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
DR   PROSITE; PS50848; START; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000008022};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          7..71
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DOMAIN          169..372
FT                   /note="START"
FT                   /evidence="ECO:0000259|PROSITE:PS50848"
FT   DNA_BIND        9..72
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT   REGION          152..171
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        152..166
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   843 AA;  91534 MW;  21DB4BD8A0558BEF CRC64;
     MVASAAAMDA SKYVRYTPEQ VEALERLYYE CPKPSSLRRQ QLVRECPALA NVDPKQIKVW
     FQNRRCREKQ RKESSRLQAL NRKLTAMNKL LMEENDRLQK QVSQLVYDHG RHGVAAAGMM
     RRVPAFPPQA AAAAGHQLAT ATDTSCESVV TSGHHHHQQQ HNVVQPPPRD ASPAGLMSIA
     EETLTEFLSK ATGTAVEWLQ MPGMKPGPDS IGIIAISHGC AGVAARACGL VGMEPAKVAE
     ILKDRPLWLR DCRSMDVVNL YAPTTLAPAR DFWLLRYTSI LDDGSLVVCE RSLSSKQGGP
     SMPLVQPFIR DEMLPSGFLI RPSDVGGSVI HIVDHMDLEP WSVPEVVRPL YESSAMVAQK
     ISMAALRYLR QVAHEDTRSV ITGWGRQPAA LRALSQKLTR GFNEALNGLA DDGWSVIESD
     GVDDVCISVN SSKVIGCNAT FSSGLPIVST GVLCAKASML LQDVSPPSLL QFLREHRSQW
     ADSNLDAFFA STMKPNFCNL PMSRLGGFSG QVILPLAHTF EPEEFLEVIK LGNASNYQDT
     LVHRDLFLLQ MYNGVEESSA GTCMFRASSL RPSTHRSVMI PHCCLPDTSS PNCTLDLAST
     LEAATPRSRI SGVNGGGGGC AAAAASSSSK AVMTIAFQFA FDGHLQDSVA AMARQYMRNI
     ISSVQRIAVA LSSSRLVPPG AGAAAAQLSP VTPEAATLPR WICQSYRFHF GAELIKSVDA
     NSSNESILKA VWHHPSAILC CSLKTMPVFT FANQSGLDML ETTLVALQDM TLEKVFDDQG
     RKNLCTELPN IMEQGMACME GGVCVSSVGR AASYEKAVAW KVVDGDGGGA HCICFMFINW
     TFL
//