ID A0A0E0N2U4_ORYRU Unreviewed; 622 AA.
AC A0A0E0N2U4;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
OS Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI01G35150.1, ECO:0000313|Proteomes:UP000008022};
RN [1] {ECO:0000313|Proteomes:UP000008022}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA Zhao Q.;
RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORUFI01G35150.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR AlphaFoldDB; A0A0E0N2U4; -.
DR STRING; 4529.A0A0E0N2U4; -.
DR EnsemblPlants; ORUFI01G35150.1; ORUFI01G35150.1; ORUFI01G35150.
DR Gramene; ORUFI01G35150.1; ORUFI01G35150.1; ORUFI01G35150.
DR eggNOG; KOG2258; Eukaryota.
DR HOGENOM; CLU_030226_4_1_1; -.
DR Proteomes; UP000008022; Unassembled WGS sequence.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08602; GDPD_ScGlpQ1_like; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR Gene3D; 3.90.940.40; Protein CHLORORESPIRATORY REDUCTION 7; 1.
DR InterPro; IPR021954; CRR7.
DR InterPro; IPR038150; CRR7-like_sf.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF42; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF12095; CRR7; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000008022};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 107..425
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT REGION 30..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..62
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 622 AA; 70934 MW; A06821BED0E16A68 CRC64;
MSQHRGGVER RIRRCAVFFS IEAKLPQAFS FSPSSSSSRW CGERSGEERP RGTRDREGEG
APKQRAAACG LRSVLSIFFF CYFHIPLFPL PSKSNGIEKR PLQTFRPYNI AHRGSNGEIP
EETAAAYLRA IEEGADFIET DILASKDGAL ICFHDVTLDA TTDVASRKEF SNRRRTYEVE
WFNVTGWFVV DFTLEELKTL KVNQRYPFRD QQYNGKFSII TFEEFISIAL DASRTVGIYP
EMKDPVFINK HVKWDGGKKF EDKFVDTLLK YGYKGQYMSE NWLKQPLFIQ SFAPTSLVHA
SKLTDSPKIF LIDDFSVRTQ DTNQSYWDIT SDDYLAYISN YVVGLGPWKD TVVPAAKNYT
MAPTDLVARA HAHNLQVHPY TYRNENQFLH LNFHQDPYAE YDFWINSMGV DGLFTDFTGS
LHRYQELVAP HAKDETANSL LVKIAQMISQ YEVAETGVIR QPMPHNLSRG RMEAAAAAST
GELLTGKSSA PLPHKRRSRD TTLCCCAHRQ QKIAAFAGSR IIFSRHVIQV VVVCAARRRR
ADIQSETYVL MEPGEEEEFV SKEELEGRLR GWLERWPGGE LPPDLARFDT VDDAVSYLVR
SVCELEIDGE VGSVQWYQVQ LE
//
