ID A0A0E3ZAR6_9FUSO Unreviewed; 379 AA.
AC A0A0E3ZAR6;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Transposase {ECO:0000313|EMBL:AKC96082.1};
GN ORFNames=VC03_06350 {ECO:0000313|EMBL:AKC96082.1};
OS Sneathia vaginalis.
OC Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Leptotrichiaceae;
OC Sneathia.
OX NCBI_TaxID=187101 {ECO:0000313|EMBL:AKC96082.1, ECO:0000313|Proteomes:UP000033103};
RN [1] {ECO:0000313|EMBL:AKC96082.1, ECO:0000313|Proteomes:UP000033103}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SN35 {ECO:0000313|EMBL:AKC96082.1,
RC ECO:0000313|Proteomes:UP000033103};
RX PubMed=23281612;
RG Vaginal Microbiome Consortium (additional members);
RA Harwich M.D.Jr., Serrano M.G., Fettweis J.M., Alves J.M., Reimers M.A.,
RA Buck G.A., Jefferson K.K.;
RT "Genomic sequence analysis and characterization of Sneathia amnii sp.
RT nov.";
RL BMC Genomics 13:S4-S4(2012).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP011280; AKC96082.1; -; Genomic_DNA.
DR RefSeq; WP_046329186.1; NZ_CP011280.1.
DR AlphaFoldDB; A0A0E3ZAR6; -.
DR STRING; 187101.VC03_06350; -.
DR KEGG; sns:VC03_06350; -.
DR PATRIC; fig|1069640.6.peg.1261; -.
DR HOGENOM; CLU_032903_0_0_0; -.
DR OrthoDB; 78864at2; -.
DR Proteomes; UP000033103; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR NCBIfam; NF038281; IS200_TnpB; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000033103};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..47
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 170..288
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 301..370
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 379 AA; 44221 MW; FA3BD8C34B2E7E98 CRC64;
MKQLKAYKFR IYPSDEQKIF FSKTFGCVRL VYNLMLNDRI KAYEESKGNP DKKLKYPTPA
KYKKEYEFLK EVDSLALANA QMNLDKAYKN FFRNKSVGFP RFKSKKNPVQ SYTTNNQNGT
VNIFEKWLKL PKLKELVKIK VHRKVNGIVK SATILRNGSG KYFISLLCET DIQEMSKTNS
SVGIDLGIKD IAILSTGEKI ENLKFRKQLE NKLKREQRKL SKRFLVAKKE NRELSESKNY
QKQRIKVAKI HEKIMNMRTD FLNKLSTYII KNHDIICIED LNTKGLLHNN KLSKSIADVS
WGNFVNKLEY KAKWYGKEII KIDRLYPSSQ ICSVCGQRDG KKTLDVREWT CTICHAHHDR
DINASKNILT EGLRIRQAV
//
