ID A0A0F0CED0_9CLOT Unreviewed; 473 AA.
AC A0A0F0CED0;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE SubName: Full=Transcriptional regulatory protein ZraR {ECO:0000313|EMBL:KJJ70212.1};
GN Name=zraR_6 {ECO:0000313|EMBL:KJJ70212.1};
GN ORFNames=CLFS41_35590 {ECO:0000313|EMBL:KJJ70212.1};
OS Clostridium sp. FS41.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1609975 {ECO:0000313|EMBL:KJJ70212.1, ECO:0000313|Proteomes:UP000033604};
RN [1] {ECO:0000313|EMBL:KJJ70212.1, ECO:0000313|Proteomes:UP000033604}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FS41 {ECO:0000313|EMBL:KJJ70212.1,
RC ECO:0000313|Proteomes:UP000033604};
RA Poehlein A., Daniel R.;
RT "Genome sequencing of Clostridium sp. FS41.";
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJJ70212.1}.
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DR EMBL; JYHN01000062; KJJ70212.1; -; Genomic_DNA.
DR RefSeq; WP_045093032.1; NZ_JYHN01000062.1.
DR AlphaFoldDB; A0A0F0CED0; -.
DR PATRIC; fig|1609975.3.peg.3807; -.
DR Proteomes; UP000033604; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000033604};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 17..64
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 166..393
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 473 AA; 53575 MW; 8FD47B37FFB4E0F0 CRC64;
MTLEAGLYTT KYFKSWELSV LLDILGKAQD AIIIIDREGT IVYINQFYEE RIGIKAEQIL
GKSLHDIEPN TKLLKVMEQA EGPGCSIETD QDVEAVEYIK SLKMDSIGYA IPLFNSKGEK
VGGCAIFKDV TEVIELTRHL QKSREMIRYL SSQLEASELP ISFQSYISRN RELQKTLSLA
AKVSPTNCTV LIQGESGVGK EVMAKCIHNA SNRKDLPMVK INCASIPENL LESELFGYED
GAFTGAKKGG KLGKFELANK STILLDEIGD MSLTMQAKLL RVLQERELER VGGTKTIPID
VRVIASTNRD LEEMIENKEF RQDLYYRLHV IPIMIPPLRQ RKEDIMPLVR YFIKYYGGED
DTDLTPGAVC ILSEYDWPGN VRELQNVIEY AMIIHTGNMI EIKDLPQYLR GDIYTEETAG
SDGLKLKPAV ENLEKRMIKE ALERNNGNKS MAISELGLSR RAFYEKLEKY QLK
//
