ID A0A0F0LSV6_9MICO Unreviewed; 253 AA.
AC A0A0F0LSV6;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=GntR family transcriptional regulator {ECO:0000313|EMBL:HAN24330.1};
DE SubName: Full=HTH-type transcriptional repressor YvoA {ECO:0000313|EMBL:KJL36198.1};
GN Name=yvoA {ECO:0000313|EMBL:KJL36198.1};
GN ORFNames=DCP95_07130 {ECO:0000313|EMBL:HAN24330.1}, RR49_01878
GN {ECO:0000313|EMBL:KJL36198.1};
OS Microbacterium ginsengisoli.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Microbacterium.
OX NCBI_TaxID=400772 {ECO:0000313|EMBL:KJL36198.1, ECO:0000313|Proteomes:UP000033451};
RN [1] {ECO:0000313|EMBL:KJL36198.1, ECO:0000313|Proteomes:UP000033451}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18659 {ECO:0000313|EMBL:KJL36198.1,
RC ECO:0000313|Proteomes:UP000033451};
RA Corretto E.;
RT "Draft genome sequences of ten Microbacterium spp. with emphasis on heavy
RT metal contaminated environments.";
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:HAN24330.1, ECO:0000313|Proteomes:UP000257479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UBA9152 {ECO:0000313|EMBL:HAN24330.1};
RX PubMed=30148503; DOI=.1038/nbt.4229;
RA Parks D.H., Chuvochina M., Waite D.W., Rinke C., Skarshewski A.,
RA Chaumeil P.A., Hugenholtz P.;
RT "A standardized bacterial taxonomy based on genome phylogeny substantially
RT revises the tree of life.";
RL Nat. Biotechnol. 36:996-1004(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJL36198.1}.
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DR EMBL; DMNG01000122; HAN24330.1; -; Genomic_DNA.
DR EMBL; JYIY01000075; KJL36198.1; -; Genomic_DNA.
DR RefSeq; WP_045247788.1; NZ_JYIY01000075.1.
DR AlphaFoldDB; A0A0F0LSV6; -.
DR STRING; 400772.RR49_01878; -.
DR PATRIC; fig|400772.4.peg.1894; -.
DR OrthoDB; 3194402at2; -.
DR Proteomes; UP000033451; Unassembled WGS sequence.
DR Proteomes; UP000257479; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 3.40.1410.10; Chorismate lyase-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR028978; Chorismate_lyase_/UTRA_dom_sf.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR011663; UTRA.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR44846:SF17; GNTR-FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR44846; MANNOSYL-D-GLYCERATE TRANSPORT/METABOLISM SYSTEM REPRESSOR MNGR-RELATED; 1.
DR Pfam; PF00392; GntR; 1.
DR Pfam; PF07702; UTRA; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00345; HTH_GNTR; 1.
DR SMART; SM00866; UTRA; 1.
DR SUPFAM; SSF64288; Chorismate lyase-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000033451}.
FT DOMAIN 22..90
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 253 AA; 28106 MW; 4E60B8FF3A5E1BB3 CRC64;
MASNEIYWPE ELFTDLDRTG PVPLYFQVSS RLEAAIHDGV IPAGARLENE IAIAARLGLS
RPTIRRAIQE LVDKGLLVRR RGIGTQVVQG QVTRPVELTS LYEDLRNSHH EPGTRVLAHE
IVPATDPVAE GLGVAVGTDV VFIRRQRSTD GVPVAVLENY LPIEFSDITT EQLQDRGLYQ
ILRARGVTIQ IAKQKIGARR AQGDEAELLD VERGGPLLTM ERIAFDNSGR ALEYGHHCYR
PDMYSFETTV VAK
//
