ID A0A0F0LVA6_9MICO Unreviewed; 256 AA.
AC A0A0F0LVA6;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=FadR family transcriptional regulator {ECO:0000313|EMBL:HAN24143.1};
DE SubName: Full=HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:KJL36225.1};
GN Name=lutR_3 {ECO:0000313|EMBL:KJL36225.1};
GN ORFNames=DCP95_06160 {ECO:0000313|EMBL:HAN24143.1}, RR49_01905
GN {ECO:0000313|EMBL:KJL36225.1};
OS Microbacterium ginsengisoli.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Microbacterium.
OX NCBI_TaxID=400772 {ECO:0000313|EMBL:KJL36225.1, ECO:0000313|Proteomes:UP000033451};
RN [1] {ECO:0000313|EMBL:KJL36225.1, ECO:0000313|Proteomes:UP000033451}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18659 {ECO:0000313|EMBL:KJL36225.1,
RC ECO:0000313|Proteomes:UP000033451};
RA Corretto E.;
RT "Draft genome sequences of ten Microbacterium spp. with emphasis on heavy
RT metal contaminated environments.";
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:HAN24143.1, ECO:0000313|Proteomes:UP000257479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UBA9152 {ECO:0000313|EMBL:HAN24143.1};
RX PubMed=30148503; DOI=.1038/nbt.4229;
RA Parks D.H., Chuvochina M., Waite D.W., Rinke C., Skarshewski A.,
RA Chaumeil P.A., Hugenholtz P.;
RT "A standardized bacterial taxonomy based on genome phylogeny substantially
RT revises the tree of life.";
RL Nat. Biotechnol. 36:996-1004(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJL36225.1}.
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DR EMBL; DMNG01000105; HAN24143.1; -; Genomic_DNA.
DR EMBL; JYIY01000075; KJL36225.1; -; Genomic_DNA.
DR RefSeq; WP_048809019.1; NZ_JYIY01000075.1.
DR AlphaFoldDB; A0A0F0LVA6; -.
DR STRING; 400772.RR49_01905; -.
DR PATRIC; fig|400772.4.peg.1921; -.
DR OrthoDB; 4164516at2; -.
DR Proteomes; UP000033451; Unassembled WGS sequence.
DR Proteomes; UP000257479; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43537:SF5; GALACTONATE OPERON TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00895; FCD; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000033451};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 25..93
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 256 AA; 27745 MW; 6352DA5BDF5FA628 CRC64;
MTLDRPASGA TSSVFGSAPA RLPAARLGVA VVRDLVGVVI NGEVAPGETL PPEERLAQHF
GVSRTVIRES VKRVEEKGLV SVAPGRGTTV QPPTSWNVLD PVVLSVMVEN DDSLGVLDEL
AVVRSALEGA MSAATAERRT DDELARVEAA LAHMEESIHD VDAYAQADAD FHFLLMELSG
NQLASNITQI LFQRARSSSR FVQNQTDEAF RLTLDEHRRI YDAIVAGDAD AAASAMRSHI
VDAWQRRRLP TRRDPS
//