ID A0A0F5F086_AVIPA Unreviewed; 619 AA.
AC A0A0F5F086;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:RZN60900.1};
GN Name=selB {ECO:0000313|EMBL:RZN60900.1};
GN ORFNames=EIG79_02155 {ECO:0000313|EMBL:RZN60900.1};
OS Avibacterium paragallinarum (Haemophilus gallinarum).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
OC Pasteurellaceae; Avibacterium.
OX NCBI_TaxID=728 {ECO:0000313|EMBL:RZN60900.1, ECO:0000313|Proteomes:UP000294229};
RN [1] {ECO:0000313|EMBL:RZN60900.1, ECO:0000313|Proteomes:UP000294229}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SA-3 {ECO:0000313|EMBL:RZN60900.1,
RC ECO:0000313|Proteomes:UP000294229};
RA Hellmuth J.E., Boucher C.E., Cason E.D.;
RT "Sequencing Av. paragallinarum serogroups.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RZN60900.1}.
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DR EMBL; RQXS01000005; RZN60900.1; -; Genomic_DNA.
DR RefSeq; WP_046097734.1; NZ_VXDA01000048.1.
DR AlphaFoldDB; A0A0F5F086; -.
DR STRING; 728.VY92_03190; -.
DR eggNOG; COG3276; Bacteria.
DR OrthoDB; 9803139at2; -.
DR Proteomes; UP000294229; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd03696; SelB_II; 1.
DR CDD; cd15491; selB_III; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR015190; Elong_fac_SelB-wing-hlx_typ-2.
DR InterPro; IPR031157; G_TR_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR048931; SelB_WH_3rd.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR PANTHER; PTHR43721:SF9; GTP-BINDING PROTEIN 1; 1.
DR Pfam; PF21214; bact_SelB_WH_2nd; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09106; SelB-wing_2; 1.
DR Pfam; PF09107; SelB-wing_3; 1.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
DR PROSITE; PS00301; G_TR_1; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Elongation factor {ECO:0000313|EMBL:RZN60900.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000313|EMBL:RZN60900.1}.
SQ SEQUENCE 619 AA; 70623 MW; DBF2AFE5C1B75BBC CRC64;
MIIVTSGHVD HGKTALLQSL TGKNADRLPE EKKRGMTIDL GYAYLPLKDK SLGFIDVPGH
EKFLSNMLAG LGGVHYAMLI IAADEGIQPQ TQEHLAILRL LRFEQIIVVI SKSDNAEEAQ
ISQLKQQITQ QYPFLTDSPF FITSARTGQG IAELQDYLAH LPERAERDRP FRYAIDRIFS
LKGVGTVVTG TAFSGQVAVD DVLYLSTGQK VRIKNIHSQD QQANEGFAGQ RLALNIQTEV
ERNAIQRGDW LFAQPPLPPT DRLTIDVEAE NLLQESQPVH IYHAATRTTG KLTLLQHKQC
YPQQNALAEL VLEQPLFLTD GDKLILRSGD AKTLVGGARV IEIRSPKRYK RTEVRLDFLH
NLQQANTTAE RLACYLQQRP LPLAELAWLS QCSATQLTAL LTQIHAHSWQ NWAFNAEYAQ
TQQANLLQTL ADYHQQHADQ LGLSKARLYR IAAIKQPEAL IYHFIDTLLA QDKIQQTRGW
LHLPEHKIRF TPQEQALWQD VLCHFEQQQG QALWVRDLAN LLEMEESEMR NFLYKAGKLG
YLTPIVRDRF ILTETLYGYA RWIKAFIEQN GQISVNQLRD QLQWGRKMTV QLMEYLDRCG
FLRRKGNVHL LRDGELFEL
//
