GenomeNet

Database: UniProt
Entry: A0A0F5YM27_9CYAN
LinkDB: A0A0F5YM27_9CYAN
Original site: A0A0F5YM27_9CYAN 
ID   A0A0F5YM27_9CYAN        Unreviewed;       402 AA.
AC   A0A0F5YM27;
DT   24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT   24-JUN-2015, sequence version 1.
DT   24-JAN-2024, entry version 32.
DE   SubName: Full=Decarboxylase {ECO:0000313|EMBL:KKD39818.1};
GN   ORFNames=WN50_01245 {ECO:0000313|EMBL:KKD39818.1};
OS   Limnoraphis robusta CS-951.
OC   Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC   Oscillatoriales; Sirenicapillariaceae; Limnoraphis.
OX   NCBI_TaxID=1637645 {ECO:0000313|EMBL:KKD39818.1, ECO:0000313|Proteomes:UP000033607};
RN   [1] {ECO:0000313|EMBL:KKD39818.1, ECO:0000313|Proteomes:UP000033607}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CS-951 {ECO:0000313|EMBL:KKD39818.1,
RC   ECO:0000313|Proteomes:UP000033607};
RA   Willis A., Parks M., Burford M.A.;
RT   "Draft genome assembly of filamentous brackish cyanobacterium Limnoraphis
RT   robusta strain CS-951.";
RL   Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC         Evidence={ECO:0000256|ARBA:ARBA00001933};
CC   -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-II family.
CC       {ECO:0000256|RuleBase:RU003737}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KKD39818.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LATL02000006; KKD39818.1; -; Genomic_DNA.
DR   RefSeq; WP_046276679.1; NZ_LATL02000006.1.
DR   AlphaFoldDB; A0A0F5YM27; -.
DR   PATRIC; fig|1637645.4.peg.113; -.
DR   OrthoDB; 9802241at2; -.
DR   Proteomes; UP000033607; Unassembled WGS sequence.
DR   GO; GO:0008836; F:diaminopimelate decarboxylase activity; IEA:InterPro.
DR   GO; GO:0009089; P:lysine biosynthetic process via diaminopimelate; IEA:InterPro.
DR   Gene3D; 3.20.20.10; Alanine racemase; 1.
DR   InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR   InterPro; IPR002986; DAP_deCOOHase_LysA.
DR   InterPro; IPR022643; De-COase2_C.
DR   InterPro; IPR022644; De-COase2_N.
DR   InterPro; IPR000183; Orn/DAP/Arg_de-COase.
DR   InterPro; IPR029066; PLP-binding_barrel.
DR   PANTHER; PTHR43727; DIAMINOPIMELATE DECARBOXYLASE; 1.
DR   PANTHER; PTHR43727:SF2; DIAMINOPIMELATE DECARBOXYLASE 1, CHLOROPLASTIC-RELATED; 1.
DR   Pfam; PF02784; Orn_Arg_deC_N; 1.
DR   Pfam; PF00278; Orn_DAP_Arg_deC; 1.
DR   PRINTS; PR01181; DAPDCRBXLASE.
DR   PRINTS; PR01179; ODADCRBXLASE.
DR   SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR   SUPFAM; SSF51419; PLP-binding barrel; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000033607}.
FT   DOMAIN          33..267
FT                   /note="Orn/DAP/Arg decarboxylase 2 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02784"
FT   DOMAIN          268..358
FT                   /note="Orn/DAP/Arg decarboxylase 2 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF00278"
SQ   SEQUENCE   402 AA;  45087 MW;  21E0D21AE1A61C9F CRC64;
     MISEMLTLPF YQELTQELLT IYGSPLYVYN GDDLRQTIQQ ISQAFPYPNT QFHFASVTNG
     NVALLKIFQA EGWGLHANTP GDIYLGLKAG FSPDAIVYSG SNLNREEMQQ VIHWGVKTLN
     LDSLEQLKLC CEVLENTTEN PDYFKLGLRL NLPEITGESR IGVHPKDFPT AIEICHKFGL
     KLSGLHFYRG TGTNATKAFT QVIDAIIHCS QQLPDWQYLD FGGGFGYPYQ HNGVAFDWEL
     FGREITNSIT KLNRKIELII EPGRAAIAGC ATLLAKVVAV KWQGEKQIVG VDTTVANLSV
     PSVHGGYREI VSFKEEKPDQ KYTTDVCGNT TYSRDYLGKN CQLPALEIGD IIAILDVGAY
     GYAMSSHFLH RPKPAEVLLE NQQHRLIRQR EDYSVLLTNQ LF
//
DBGET integrated database retrieval system