ID A0A0G0I3W6_9BACT Unreviewed; 1008 AA.
AC A0A0G0I3W6;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN ORFNames=US22_C0054G0007 {ECO:0000313|EMBL:KKQ10796.1};
OS candidate division TM6 bacterium GW2011_GWF2_36_6.
OC Bacteria; Candidatus Dependentiae.
OX NCBI_TaxID=1619082 {ECO:0000313|EMBL:KKQ10796.1, ECO:0000313|Proteomes:UP000034938};
RN [1] {ECO:0000313|EMBL:KKQ10796.1, ECO:0000313|Proteomes:UP000034938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Brown C.T., Hug L.A., Thomas B.C., Sharon I., Castelle C.J., Singh A.,
RA Wilkins M.J., Williams K.H., Banfield J.F.;
RT "rRNA introns, odd ribosomes, and small enigmatic genomes across a large
RT radiation of phyla.";
RL Nature 0:0-0(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KKQ10796.1}.
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DR EMBL; LBSD01000054; KKQ10796.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0G0I3W6; -.
DR PATRIC; fig|1619082.3.peg.538; -.
DR Proteomes; UP000034938; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02655; RNAP_beta'_C; 1.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.150.390; -; 1.
DR Gene3D; 1.10.1790.20; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 2.40.50.100; -; 3.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 2.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR012754; DNA-dir_RpoC_beta_prime_bact.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR NCBIfam; TIGR02386; rpoC_TIGR; 1.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF54; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:KKQ10796.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..138
FT /note="RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00663"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KKQ10796.1"
SQ SEQUENCE 1008 AA; 111432 MW; 8DCB88DDA37A6810 CRC64;
FKPYVYVELQ RRELAENLRV AKRMVEEMTS EVWEALEEVV RDRPVLLNRA PTLHRLGIQA
FYPMLVEGKA IKIHPLVCSA FNADFDGDQM AVHILLSQKA RLEAENLMLS TKNILSPASG
RPLPTPSQDM VLGLYYMTKG RKNVPGEGLI FSSVEEVIYA YQHGQVDIQA SIKLRMKAGN
IVETTVGRVI LFEALPESAE IEWVNKAVKK KDIAKLVEKM YKVCGAPATV VALDKIKLLG
FSNATLGGIS LSMENLVIPD SKYKAVSNGL KEVGDVEQLY LEGAITNGER YNKVIQIWAK
ATESVTNDMI SVLEDQDKAS SANMDKNNIP FNPVFMMLDS GARGSRQQIR QLAAMRGLMA
TPSGEIMETP VLANFKEGLN VFEYFISTHG ARKGLADTAL KTADSGYLTR RLVDVSQDVV
ISQHDCQTLG YLSLSELRES GEVLAPLTKR VFGRVAAEDI KDPVSGKLIA KQGDLLDDAV
IEILKDSAVT EVAARSVLTC QAKRGVCANC YGMDLSTQKL VDIGTAVGII AAQSIGEPGT
QLTMRTFHVG GTASGLVEEN FYKSKFSGKV VFKGIYAVKN KKGVWVVVNR RSKIAIVSED
GRELEEYRIE YGTWLLVNDG DMVEKGKKLA EWDPFKVIMT ERAGHVQFID LIENVTYQEQ
FDETVGRSNK MILEKRDERR QPCVAIMDSE NGEIARYYLP TGAILTIEDN TNVYPGDILA
KLHREEKKTK DITGGLPRVT ELFEARVPRD AAILSEVDGV VKFGGVHRGQ RKITVTTDEG
EVFEYNVPRN RHLNVEDGEH VKAGDALTFG VPNAHDVLKI LGPDAVQSYL VKEVQEIYTL
QGVDIHDKHI ETIVRQMLRK VRIVEPNDTN FVVGDRVDKL QLQAINKALA KEGKKVATAK
PILMGITKAS LGTESFISAA SFQETTRVLT EAALAGQVDY LYGLKENIII GKIIPAGTGI
STFKKKYIGE DVTDFEKQAR DEEQLEAGLD KISLKVNQAR SSVGRALL
//
