ID A0A0G9HDT5_9GAMM Unreviewed; 813 AA.
AC A0A0G9HDT5;
DT 16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT 16-SEP-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=DEAD/DEAH box helicase {ECO:0000313|EMBL:KLD67920.1};
DE SubName: Full=DNA ligase-associated DEXH box helicase {ECO:0000313|EMBL:APG05300.1};
GN ORFNames=BJI69_16265 {ECO:0000313|EMBL:APG05300.1}, Y883_05940
GN {ECO:0000313|EMBL:KLD67920.1};
OS Luteibacter rhizovicinus DSM 16549.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Luteibacter.
OX NCBI_TaxID=1440763 {ECO:0000313|EMBL:APG05300.1, ECO:0000313|Proteomes:UP000182987};
RN [1] {ECO:0000313|EMBL:KLD67920.1, ECO:0000313|Proteomes:UP000035585}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16549 {ECO:0000313|EMBL:KLD67920.1,
RC ECO:0000313|Proteomes:UP000035585};
RX PubMed=25481407; DOI=10.1007/s10482-014-0344-8;
RA Naushad S., Adeolu M., Wong S., Sohail M., Schellhorn H.E., Gupta R.S.;
RT "A phylogenomic and molecular marker based taxonomic framework for the
RT order Xanthomonadales: proposal to transfer the families Algiphilaceae and
RT Solimonadaceae to the order Nevskiales ord. nov. and to create a new family
RT within the order Xanthomonadales, the family Rhodanobacteraceae fam. nov.,
RT containing the genus Rhodanobacter and its closest relatives.";
RL Antonie Van Leeuwenhoek 107:467-485(2015).
RN [2] {ECO:0000313|EMBL:APG05300.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=LJ96 {ECO:0000313|EMBL:APG05300.1};
RX PubMed=28123952;
RA Aamot H.U., Hofgaard I.S., Lysoe E.;
RT "Complete genome sequence of Luteibacter rhizovicinus strain LJ96T,
RT isolated from the rhizosphere of barley (Hordeum vulgare L.) in Denmark.";
RL Genom Data 11:104-105(2016).
RN [3] {ECO:0000313|Proteomes:UP000182987}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LJ96T {ECO:0000313|Proteomes:UP000182987};
RA Capua I., De Benedictis P., Joannis T., Lombin L.H., Cattoli G.;
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP017480; APG05300.1; -; Genomic_DNA.
DR EMBL; JPLB01000017; KLD67920.1; -; Genomic_DNA.
DR RefSeq; WP_046966811.1; NZ_JPLB01000017.1.
DR AlphaFoldDB; A0A0G9HDT5; -.
DR STRING; 1440763.BJI69_16265; -.
DR KEGG; lrz:BJI69_16265; -.
DR PATRIC; fig|1440763.5.peg.888; -.
DR OrthoDB; 9815222at2; -.
DR Proteomes; UP000035585; Unassembled WGS sequence.
DR Proteomes; UP000182987; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd18796; SF2_C_LHR; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR013701; DEAD/DEAH_assoc.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR026362; DEXH_lig_assoc.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR017170; Lhr-like_ATP-dep_RNA_helic_prd.
DR InterPro; IPR045628; Lhr_WH_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR04121; DEXH_lig_assoc; 1.
DR PANTHER; PTHR47962; ATP-DEPENDENT HELICASE LHR-RELATED-RELATED; 1.
DR PANTHER; PTHR47962:SF3; LARGE ATP-DEPENDENT HELICASE-RELATED PROTEIN; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08494; DEAD_assoc; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF19306; Lhr_WH; 1.
DR PIRSF; PIRSF037307; Lhr-like_helic_prd; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:KLD67920.1};
KW Hydrolase {ECO:0000313|EMBL:KLD67920.1};
KW Ligase {ECO:0000313|EMBL:APG05300.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 37..215
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 245..407
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 813 AA; 89962 MW; 12731A8B4B053CFE CRC64;
MPTNSTTSAA WRRAEARLVA WFAAQERRPA AFQRAAWRAW AEGRNGLIHA PTGTGKTLAA
AGGPLIDALL RPQTGLQLIW ITPLRSLATD TAQHLTAAVE AMELPWRVLR RTGDSGSAER
ARLRRGACEL LVTTPESLAL LLSYPDARER FANLRGIVVD EWHELIGNKR GTLLQLGLAR
LHRWLPALRT WGLSATLGNL DEALHALAGD GVLIGGTSRK KTHIDTALPD GGERFPWAGH
LGLSQLPRVL DAVLAARTSL VFANTRSQAE LWHEALASVW PGPPETLALH HGSIDPKLRF
ATEENLRLGT LRCVVATSSL DLGVDFSSVE QVLQVGSPKS IARLLQRAGR SGHQPGMPSR
ILCVPTHLLE LAEIAAARRA LSEDHLEPRH PMRGCLDVLA QHLLTMALGG GFIADDAYSE
VTSSLAYAQL PRERFDAVLA YLRTGGTALA SYPEYQKLVL TDGRYHVDSG RIARMHRLSI
GTITSDGSLQ VRYMKGARLG TVEESFLSRL RPGDRFLFAG RNLELVRIRD MTAYVRAAPN
RRGGVPRWMG GKLPLSGELS DELRRTLAEG VPRSAEMRTL APLLAIQRSR SAIPALDETL
CERTRTREGD YLFLFPFAGR LAHEGLAAVL AYRLARIHPG DYGYAVNDYG LTLTAARMPP
LDAEAMRQLL HPARLRTDIL ASVNLTELAR RQFREIARVA GLVFNGYPAA GKTMRQLQAS
SGLLFDVLRR HDPTHPLLWQ AEREVLDQQL DYTRLRACLL RVARSRLLWR EPKRLSPLAF
PLWVERLRGG IATDDWKSRV ERMRSTLEAD ADT
//
