ID A0A0H2LQQ4_VARPD Unreviewed; 259 AA.
AC A0A0H2LQQ4;
DT 16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT 16-SEP-2015, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=HTH-type transcriptional regulator KipR {ECO:0000313|EMBL:KLN52643.1};
GN Name=kipR6 {ECO:0000313|EMBL:KLN52643.1};
GN ORFNames=VPARA_62670 {ECO:0000313|EMBL:KLN52643.1};
OS Variovorax paradoxus.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=34073 {ECO:0000313|EMBL:KLN52643.1, ECO:0000313|Proteomes:UP000035170};
RN [1] {ECO:0000313|EMBL:KLN52643.1, ECO:0000313|Proteomes:UP000035170}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TBEA6 {ECO:0000313|EMBL:KLN52643.1,
RC ECO:0000313|Proteomes:UP000035170};
RA Poehlein A., Schuldes J., Wuebbeler J.H., Hiessl S., Steinbuechel A.,
RA Daniel R.;
RT "Genome sequence of Variovorax paradoxus TBEA6.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KLN52643.1}.
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DR EMBL; JZWI01000048; KLN52643.1; -; Genomic_DNA.
DR RefSeq; WP_021004365.1; NZ_JZWI01000048.1.
DR AlphaFoldDB; A0A0H2LQQ4; -.
DR PATRIC; fig|34073.19.peg.6447; -.
DR Proteomes; UP000035170; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF33; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000035170};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..74
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 75..258
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 259 AA; 28337 MW; D7AEF10FF64FEC13 CRC64;
MNDTDNKDRQ FATTLASGID LLLCFHPGES SLANKDFAQR TGLSKPTVAR LTHTLALLGY
LRRDPATASY RLGAAVLGLS HPLLASMRIR PIARPMMETL AREIEGAVSL GLRHRIHMVY
VETARSSEDF VLTPDIGAPL PMLATAIGRA WLARAAPEDR LSVLNQIRVA APAEFERHAA
AAELAREELA RDGFCSARAD WQPNRHGFAV PLHGLVDGMQ FVLNCAVATK RGSFAQMRRD
VAPRLLTLAH SIEFSLGLR
//
