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Database: UniProt
Entry: A0A0H2MBG1_VARPD
LinkDB: A0A0H2MBG1_VARPD
Original site: A0A0H2MBG1_VARPD 
ID   A0A0H2MBG1_VARPD        Unreviewed;       281 AA.
AC   A0A0H2MBG1;
DT   16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT   16-SEP-2015, sequence version 1.
DT   24-JAN-2024, entry version 30.
DE   SubName: Full=HTH-type transcriptional regulator YiaJ {ECO:0000313|EMBL:KLN57972.1};
GN   Name=yiaJ {ECO:0000313|EMBL:KLN57972.1};
GN   ORFNames=VPARA_09840 {ECO:0000313|EMBL:KLN57972.1};
OS   Variovorax paradoxus.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=34073 {ECO:0000313|EMBL:KLN57972.1, ECO:0000313|Proteomes:UP000035170};
RN   [1] {ECO:0000313|EMBL:KLN57972.1, ECO:0000313|Proteomes:UP000035170}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TBEA6 {ECO:0000313|EMBL:KLN57972.1,
RC   ECO:0000313|Proteomes:UP000035170};
RA   Poehlein A., Schuldes J., Wuebbeler J.H., Hiessl S., Steinbuechel A.,
RA   Daniel R.;
RT   "Genome sequence of Variovorax paradoxus TBEA6.";
RL   Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KLN57972.1}.
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DR   EMBL; JZWI01000005; KLN57972.1; -; Genomic_DNA.
DR   RefSeq; WP_047783524.1; NZ_JZWI01000005.1.
DR   AlphaFoldDB; A0A0H2MBG1; -.
DR   PATRIC; fig|34073.19.peg.998; -.
DR   Proteomes; UP000035170; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR   InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR   PANTHER; PTHR30136:SF24; HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLR; 1.
DR   Pfam; PF09339; HTH_IclR; 1.
DR   Pfam; PF01614; IclR; 1.
DR   SMART; SM00346; HTH_ICLR; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS51077; HTH_ICLR; 1.
DR   PROSITE; PS51078; ICLR_ED; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000035170};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          14..75
FT                   /note="HTH iclR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51077"
FT   DOMAIN          76..256
FT                   /note="IclR-ED"
FT                   /evidence="ECO:0000259|PROSITE:PS51078"
SQ   SEQUENCE   281 AA;  30136 MW;  F026BA84AA0961EF CRC64;
     MRKNQSDVPA VPVIQVIERM FALIDVLASR EEAISLKEIS EKTGLHPSTT HRILNDLAVG
     RFVDRPEAGS YRLGMRLLEL GNLVKGRLNV RDAALGPMRE LHKLTQQPVN LSMRQGDEIV
     YIERSYSERS GMQVVRAIGG RAALHLTSTG KLFLAADDPQ RVRSYATRTG LAGHTRNSIT
     QLPALERELS KARQYGIARD NEELELGVRC MAAGIYDDQG KLVAGLSISA PADRLDEGWL
     PKLQATANEI SGALGYKDAA AVAAAGSAAI GASGASGPTA G
//
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