ID A0A0H4NZ98_9BACI Unreviewed; 260 AA.
AC A0A0H4NZ98;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=RNA polymerase sigma factor for flagellar operon {ECO:0000313|EMBL:AKP46889.1};
GN ORFNames=BSM4216_1608 {ECO:0000313|EMBL:AKP46889.1};
OS Bacillus smithii.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=1479 {ECO:0000313|EMBL:AKP46889.1, ECO:0000313|Proteomes:UP000036353};
RN [1] {ECO:0000313|EMBL:AKP46889.1, ECO:0000313|Proteomes:UP000036353}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 4216 {ECO:0000313|EMBL:AKP46889.1,
RC ECO:0000313|Proteomes:UP000036353};
RA Bosma E.F., Koehorst J.J., van Hijum S.A.F.T., Renckens B., Vriesendorp B.,
RA van de Weijer A.H.P., Schaap P.J., de Vos W.M., van der Oost J.,
RA van Kranenburg R.;
RT "Complete genome sequence of thermophilic Bacillus smithii type strain DSM
RT 4216T.";
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP012024; AKP46889.1; -; Genomic_DNA.
DR RefSeq; WP_048623181.1; NZ_CP012024.1.
DR AlphaFoldDB; A0A0H4NZ98; -.
DR STRING; 1479.BSM4216_1608; -.
DR KEGG; bsm:BSM4216_1608; -.
DR eggNOG; COG1191; Bacteria.
DR OrthoDB; 9799825at2; -.
DR Proteomes; UP000036353; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.20.140.160; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR012845; RNA_pol_sigma_FliA_WhiG.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR NCBIfam; TIGR02479; FliA_WhiG; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30385:SF7; RNA POLYMERASE SIGMA FACTOR FLIA; 1.
DR PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 4: Predicted;
KW Cell projection {ECO:0000313|EMBL:AKP46889.1};
KW Cilium {ECO:0000313|EMBL:AKP46889.1}; Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Flagellum {ECO:0000313|EMBL:AKP46889.1};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 220..246
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00716"
FT COILED 109..149
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 260 AA; 30222 MW; E4E6BEF004F44FD3 CRC64;
MIDVQLVEEK KWWDLWLTSR DPDAGDLLVK RYTPLVSYHV QRLSVHMPKN VSRDELKSLG
FLGLVDALTK FDPSRDLKFD TYASFRIRGA ILDGLRKEDW LPRGTREKAK KIEAKIEELE
QQFLRHVTAE EVANELDMSV EELQQIMAEY YTANILSMDD QIKDQEEMDG KGYDIKDDRI
STPEEEVVKE ELIQELSREI AGLSEKEKLV LSLFYQEELT LTEIGEILNL STSRISQIHS
KALFKLRNKL KKVSGIPFRC
//
