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Database: UniProt
Entry: A0A0J1GTA5_9GAMM
LinkDB: A0A0J1GTA5_9GAMM
Original site: A0A0J1GTA5_9GAMM 
ID   A0A0J1GTA5_9GAMM        Unreviewed;       629 AA.
AC   A0A0J1GTA5;
DT   14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT   14-OCT-2015, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|ARBA:ARBA00020461, ECO:0000256|HAMAP-Rule:MF_00129};
DE   AltName: Full=Glucose-inhibited division protein A {ECO:0000256|ARBA:ARBA00031800, ECO:0000256|HAMAP-Rule:MF_00129};
GN   Name=gidA {ECO:0000256|HAMAP-Rule:MF_00129,
GN   ECO:0000313|EMBL:KLV02896.1};
GN   Synonyms=mnmG {ECO:0000256|HAMAP-Rule:MF_00129};
GN   ORFNames=ABT58_01300 {ECO:0000313|EMBL:KLV02896.1};
OS   Photobacterium aphoticum.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
OX   NCBI_TaxID=754436 {ECO:0000313|EMBL:KLV02896.1, ECO:0000313|Proteomes:UP000036426};
RN   [1] {ECO:0000313|EMBL:KLV02896.1, ECO:0000313|Proteomes:UP000036426}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 25995 {ECO:0000313|EMBL:KLV02896.1,
RC   ECO:0000313|Proteomes:UP000036426};
RA   Machado H., Gram L.;
RT   "Photobacterium galathea sp. nov.";
RL   Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: NAD-binding protein involved in the addition of a
CC       carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of
CC       certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
CC       {ECO:0000256|ARBA:ARBA00003717, ECO:0000256|HAMAP-Rule:MF_00129}.
CC   -!- COFACTOR:
CC       Name=FAD; Xref=ChEBI:CHEBI:57692;
CC         Evidence={ECO:0000256|ARBA:ARBA00001974,
CC         ECO:0000256|HAMAP-Rule:MF_00129};
CC   -!- SUBUNIT: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
CC       {ECO:0000256|ARBA:ARBA00025948, ECO:0000256|HAMAP-Rule:MF_00129}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00129}.
CC   -!- SIMILARITY: Belongs to the MnmG family. {ECO:0000256|ARBA:ARBA00007653,
CC       ECO:0000256|HAMAP-Rule:MF_00129}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KLV02896.1}.
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DR   EMBL; LDOV01000002; KLV02896.1; -; Genomic_DNA.
DR   RefSeq; WP_047872557.1; NZ_PYMF01000133.1.
DR   AlphaFoldDB; A0A0J1GTA5; -.
DR   PATRIC; fig|754436.4.peg.273; -.
DR   OrthoDB; 9815560at2; -.
DR   Proteomes; UP000036426; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR   Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 2.
DR   Gene3D; 1.10.150.570; GidA associated domain, C-terminal subdomain; 1.
DR   Gene3D; 1.10.10.1800; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA; 1.
DR   HAMAP; MF_00129; MnmG_GidA; 1.
DR   InterPro; IPR036188; FAD/NAD-bd_sf.
DR   InterPro; IPR049312; GIDA_C_N.
DR   InterPro; IPR004416; MnmG.
DR   InterPro; IPR002218; MnmG-rel.
DR   InterPro; IPR020595; MnmG-rel_CS.
DR   InterPro; IPR026904; MnmG_C.
DR   InterPro; IPR047001; MnmG_C_subdom.
DR   InterPro; IPR044920; MnmG_C_subdom_sf.
DR   InterPro; IPR040131; MnmG_N.
DR   NCBIfam; TIGR00136; gidA; 1.
DR   PANTHER; PTHR11806; GLUCOSE INHIBITED DIVISION PROTEIN A; 1.
DR   PANTHER; PTHR11806:SF0; PROTEIN MTO1 HOMOLOG, MITOCHONDRIAL; 1.
DR   Pfam; PF01134; GIDA; 1.
DR   Pfam; PF13932; GIDA_C; 1.
DR   Pfam; PF21680; GIDA_C_1st; 1.
DR   SMART; SM01228; GIDA_assoc_3; 1.
DR   SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR   PROSITE; PS01280; GIDA_1; 1.
DR   PROSITE; PS01281; GIDA_2; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00129};
KW   FAD {ECO:0000256|ARBA:ARBA00022827, ECO:0000256|HAMAP-Rule:MF_00129};
KW   Flavoprotein {ECO:0000256|ARBA:ARBA00022630, ECO:0000256|HAMAP-
KW   Rule:MF_00129};
KW   NAD {ECO:0000256|ARBA:ARBA00023027, ECO:0000256|HAMAP-Rule:MF_00129};
KW   Reference proteome {ECO:0000313|Proteomes:UP000036426};
KW   tRNA processing {ECO:0000256|ARBA:ARBA00022694, ECO:0000256|HAMAP-
KW   Rule:MF_00129}.
FT   DOMAIN          546..617
FT                   /note="tRNA uridine 5-carboxymethylaminomethyl modification
FT                   enzyme C-terminal subdomain"
FT                   /evidence="ECO:0000259|SMART:SM01228"
FT   BINDING         13..18
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00129"
FT   BINDING         125
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00129"
FT   BINDING         180
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00129"
FT   BINDING         273..287
FT                   /ligand="NAD(+)"
FT                   /ligand_id="ChEBI:CHEBI:57540"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00129"
FT   BINDING         370
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00129"
SQ   SEQUENCE   629 AA;  69693 MW;  6297A7BD237F6238 CRC64;
     MFYQDNFDVI VVGGGHAGTE AALAAARMGQ KTLLLTHNID TLGQMSCNPA IGGIGKGHLV
     KEVDALGGLM AQAIDKGGIQ FRTLNSSKGP AVRATRAQAD RALYKAAVRE ALENQPNLTL
     FQQSVDDLII ENHRVVGAVT KMGLKFRAKA VVLTVGTFLG GKIHIGLENY SGGRAGDPPS
     IALASRLREL PFRVNRLKTG TPPRIDARTV DFSQLQAQHG DNPTPLFSFM GKQSDHPRQI
     PCFITHTNEK THDVIRNNLD RSPMYSGVIE GIGPRYCPSI EDKVMRFADK DSHQIFIEPE
     GLTTHELYPN GISTSLPFDV QMQIVRSMKG FENAAIVRPG YAIEYDFFDP RDLKQTFETK
     FIDGLFFAGQ INGTTGYEEA AAQGLLAGMN AALSAQDKEG WSPRRDQAYM GVLIDDLSTM
     GTKEPYRMFT SRAEYRLLLR EDNADLRLTE IGRQYGLVDD ARWARFNQKI DNMEAERQRL
     KGIWVTPTSE QVEAVNAILK TPIAREASGE DLLRRPEVTY EQLTQIDMFG PAHEDAQASE
     QVEIQVKYQG YIDRQQDEVE KSLRHEKTKL PLDLDYSQVK GLSNEVILKL NDARPETIGM
     ASRISGVTPA AISLLLVFLK KQGVLKKGA
//
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