ID A0A0J6ZRY0_9FIRM Unreviewed; 631 AA.
AC A0A0J6ZRY0;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KMO87711.1};
GN ORFNames=AB840_00840 {ECO:0000313|EMBL:KMO87711.1};
OS Megasphaera cerevisiae DSM 20462.
OC Bacteria; Bacillota; Negativicutes; Veillonellales; Veillonellaceae;
OC Megasphaera.
OX NCBI_TaxID=1122219 {ECO:0000313|EMBL:KMO87711.1, ECO:0000313|Proteomes:UP000036503};
RN [1] {ECO:0000313|EMBL:KMO87711.1, ECO:0000313|Proteomes:UP000036503}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 20462 {ECO:0000313|EMBL:KMO87711.1,
RC ECO:0000313|Proteomes:UP000036503};
RA Kutumbaka K., Pasmowitz J., Mategko J., Reyes D., Friedrich A., Han S.,
RA Martens-Habbena W., Neal-McKinney J., Janagama H.K., Nadala C.,
RA Samadpour M.;
RT "Draft genome sequence of beer spoilage bacterium Megasphaera cerevisiae
RT type strain 20462.";
RL Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMO87711.1}.
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DR EMBL; LEKT01000002; KMO87711.1; -; Genomic_DNA.
DR RefSeq; WP_048512932.1; NZ_LEKT01000002.1.
DR AlphaFoldDB; A0A0J6ZRY0; -.
DR STRING; 39029.BSR42_07535; -.
DR PATRIC; fig|1122219.3.peg.186; -.
DR InParanoid; A0A0J6ZRY0; -.
DR OrthoDB; 9803970at2; -.
DR Proteomes; UP000036503; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0000150; F:DNA strand exchange activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR006120; Resolvase_HTH_dom.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02796; HTH_7; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF159800; PrpR receptor domain-like; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000036503};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 325..551
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 631 AA; 71215 MW; C9426F5D1C953164 CRC64;
MEKISFLVAD ESLKNDIERT LWTYRNSFGS THISTEIEII NFPHLIEQGN YMIQKGAQVI
ITNSGSHQIL SGAIDDIPIL CLYSSTNDAL YTLRKVEHYK KIHLLLNKHF MFNMSACSPH
IAKKLQLHPP YSVSTSQNEI LKILDKIPVT PDTAIVGCTL LPQIAAHIPM PIYPIRPSES
TILSVYQYAN ELIAFHRKDR KQLSLLTSVL SHVDEGIILY DKEGKISHIN KQARIFLKAS
SHAKKIREIF PDLPYSAAAP MQFKERIIQS PPYTLVVNSA PFQIEKESHY ILAIRDVTEL
QRLEKNIRYK LAKTGLQAAH HFDAIKTASS NMQAVIDTAK IISAYTAPVL IQGESGTGKE
LFAQSIHNAS PRRSGPFVVV NCAALPPELL ESELFGYVGG AFTGARKEGK AGYFELAHTG
TIFLDEINSM SPNIQSKLLR VLETKAVMRI GSDYIIPLDI RIISASNADI MQAVQSGNFR
RDLFFRLNTL TLNLPSLNDR PSDIVFLFSQ FLQTLSGQTP SLPPGLKTAL EQHHWWGNIR
ELHSVALRYH IFGNTSDSTY QYLFDQPHTQ ESQFPLIDKD TLRIDMKQLH KEVELLIIHN
LRQQGYTKLQ IAKILNISRQ TLFNKIKSAA R
//
