ID A0A0J7K8D3_LASNI Unreviewed; 731 AA.
AC A0A0J7K8D3;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012493};
DE EC=2.7.7.49 {ECO:0000256|ARBA:ARBA00012493};
GN ORFNames=RF55_14387 {ECO:0000313|EMBL:KMQ86587.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMQ86587.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMQ86587.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMQ86587.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMQ86587.1}.
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DR EMBL; LBMM01011855; KMQ86587.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0J7K8D3; -.
DR STRING; 67767.A0A0J7K8D3; -.
DR PaxDb; 67767-A0A0J7K8D3; -.
DR OrthoDB; 3151786at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0042575; C:DNA polymerase complex; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0071897; P:DNA biosynthetic process; IEA:UniProt.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 1..80
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 423..593
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 698..731
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 731 AA; 83727 MW; 976B6BF6F61E9795 CRC64;
MPFGLRNAAQ TFQRFINEVL HNLEFCYAYI DDTLVASKTE EEHEEHLRRL FQRLSEYGLV
INPTKCVFGE QQVKFLGYLV TTEGTKPLSE KVPAIQDFPK PTTVKQMRQF LGMLNFYRRF
ISGAAEDQAK LNDTLAGPKT KGKVPINWTT ELEEAFTKAK NSLSRAALLA HPDPKGELAV
TTDASDTAIG AVIQQKTEKD WQPLAFMSKK LSPTQRKYSP YDRELLAIYT AVKYYRHLLE
GRKFTIYTDH KPLIYAFRQD PLRSSPRQTR HLEFIGQFST DIRHISGKDN IVADTLSRVE
GIQKAIDFKE LAESQEEDEE LQQLQQSDTA LKFKKIPIPG TNVTLYCDTE TPIPRPFVTK
PFRKKVFNSL HGLSHPGVKA TAKLVMQRYV WPGIQKECRI WAQTCIQCQK AKITRHNKTP
PGIFQVPTRR FEHIHIDIVG PLPTSKGCKY CLTIIDRYTR WPEAIPLPDI TAETIATNIF
SAWITRFGIP LRITTDQGRQ FESNLFKRLT QLTGSKHIRT TAYHPAANGM VERFHRQLKT
AIKCHQTESW VEILPVVLMG IRTAWKEDLQ ATTAELVFGE PLKLPGQFLQ QQEDTEQMED
PGNILAKLKK ALESMRPQVK RHGQAATFIF QDLKTASHVF LRKELMGGSL QPPYEGPYKV
VRRDEKTITI LRNNKESKVS IDRVKSVYVL NEENTAMEPV RAKRSEQQDN PAEITTRSGK
TSRKTIRFKP T
//
