ID A0A0J7L7D1_LASNI Unreviewed; 2009 AA.
AC A0A0J7L7D1;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=Limkain-b1-like protein {ECO:0000313|EMBL:KMQ98434.1};
GN ORFNames=RF55_1203 {ECO:0000313|EMBL:KMQ98434.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMQ98434.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMQ98434.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMQ98434.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMQ98434.1}.
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DR EMBL; LBMM01000407; KMQ98434.1; -; Genomic_DNA.
DR STRING; 67767.A0A0J7L7D1; -.
DR PaxDb; 67767-A0A0J7L7D1; -.
DR OrthoDB; 5311892at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd08824; LOTUS; 1.
DR CDD; cd09979; LOTUS_3_Limkain_b1; 1.
DR CDD; cd09981; LOTUS_5_Limkain_b1; 1.
DR CDD; cd12255; RRM1_LKAP; 1.
DR CDD; cd12256; RRM2_LKAP; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 3.30.420.610; LOTUS domain-like; 3.
DR InterPro; IPR029336; DUF4594.
DR InterPro; IPR041966; LOTUS-like.
DR InterPro; IPR045602; MARF1_LOTUS.
DR InterPro; IPR034189; MARF1_RRM1.
DR InterPro; IPR034191; MARF1_RRM2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF15266; DUF4594; 1.
DR Pfam; PF19687; MARF1_LOTUS; 1.
DR Pfam; PF11608; MARF1_RRM1; 1.
DR Pfam; PF12872; OST-HTH; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS51644; HTH_OST; 4.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 692..765
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 1347..1421
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 1423..1498
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 1508..1582
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 1585..1658
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT REGION 17..167
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 228..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 265..443
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 561..616
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 964..1036
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1966..2009
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..35
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 67..88
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 108..130
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 140..167
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 291..313
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 314..328
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 339..395
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 398..443
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 561..587
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 588..607
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 987..1028
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1973..1987
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2009 AA; 227493 MW; 2A7A4E0F632AF1E0 CRC64;
MATSALEEKI NKIRQQNEEI RRRHEEVEED KKNAAKLNAL VQMVPSTDWP ERKEPPEFSN
PPRTNNKSKS TKEHHEHPQQ HHSASGEGRK GHTFAQGQGP PPDPKYNFLA DAEREEGNTE
SPKDNPPNKG QKHSKGTFKR KPGGKDGLQK DYRMNRGHRR DEHQPEYEAW RAERNRIDED
RISRQRTAEG NWRREWDNDK AHIVNEMTRS EVKLGDYAKK EHKDFDRRHY VNGNDYEGHV
KNPVSSSSED RTVIATDKSI KVTLNQGKGP VMSVKVNSPS IAGTGRVGPR QRSRITYSSH
SDVEMVSPDT ESFSRPKSYE DKKGIYHDNQ QKFSNSRKSQ PPKKKDFSNK SPYFRKKEIR
REDVNEDPQE HKVESPQEEE HKESQKSDQF KLQKPEENNV KPLQNDNIVN EKENNAISSD
ELDTNTDVKN SDNQNDSLNS YIDEKSEVYA NEEGEFILQD SDLPVSKDEI EICKISEEVE
NKLDESQIVQ TATMSEYDEI TETDLTASLV KDINDNDRDK TKSVGNLSCD ANDEIDETVM
GNEEHNSPTE QIEEILSDNC DSKQTEDINE QENDVKLNTE SSAEEKKGTD NLIISSSTDI
SSITEQNNKM DSDDKSLEEK EVATVEDNVT VIDDKINTSN KEEVIKYTNE TKECKDDNNE
NGSNAANSIV IDKVESQEED LQVEEVKGNE SYDLLVSNLP DEKDVNVIKR RLKQLSENCG
GRVIDVQSNT AIVRFTSHSS ADRAQKRMEG EYVLGSKILV KYLGKEKGNT IGKNLGNIIT
RSRAVSDSEI VTSPKQSSSK QMYAASASVL GTRTLQFPNY QTSSPVVGAY PAFNPHCAPI
NAPLSGMVQQ PPIFFGRSFA NNDVTFNRTY NELARVQSPL IWPIAGPHQY SHIWEEQYKV
EKSKILGKRA HVSQVRDNNV AIGVTSRTPE GLRRIRGTHG SFAYASEWVG GRQSYNSLAV
PLNYNGQSNS FKRRSPSPLY DAPTREKNTW HGQNQQQIST RNNKTPSPYE NNLLQGTGQH
NQTSRSSHLS DAENEEVEKF CNPISNRNGS SGNNGTNTPI ELQVTNLDQS IDIKDMKKIL
SSIFMEHVSS CHVSVFIQSD GNFAASVKVP SLPDAQYAIS QLHRRKIGYK RILISYAHIG
GPNPQLIRAQ IVLLLQEVPG HKLPLFKFRE MYESRFMISV SVSELYKMRD VCVITEDPSG
RMVSLNPDHR NTPSPCNTVQ DGQVKLPYCT IHIAKPVSDK GWAEQEMASL PNVKISLKVL
ESRMQELLAS HNGILPLPSL PNCYEAEFKE KLEIVENGVP LEHLVSCLSC VELRQDIGSV
KYLVWIGKKD HESNDETKCV SPSLANQLAL FSRELVDLLK TAPHCQLSFN RFIPAYHHHF
GRQCRVADYG FTKLIDLLEA LTHTVQVMGE GNKRVVTLSH RAQVRRFTSD LLRVLKSKAS
KQVALSEFPN VYGRVIAKPW DIVDYGVCNI EDILGEVSEN TVVVTSIEDG DKMIAIPKRE
QTAEEIERTR LFAKEVVELL QHAPQCRMLF NKFVPSYHHH FGHQCRVSDY GFTKLIELFE
SIPDIVKIEE VNGGERQISL TEKEGLKVLA EQISKLIMRT RGGLMISSIA QTFLHQFGYA
LRPELFGCNS MLHLMQKLGD TIQIIDLATG PAIITIDKSH LQQTTLQCRR VLMDQPQHRM
PITEFVQQYS QYYLKQCNLD EFRKNLANVV RFTEVNGEEF IELTPLHRFA CDLYRVMMNC
GAAAGILLPT VYKPMSSYHD TDSSNDSFES DSSYRVNVSN TLGIVDNHEK WIDQLTNINS
WKAKEDKVLW SENRIKHWKN LASSEERSIN WPESGGESFL RSLIRTPIMQ HDFPPPPPKP
DSPPEDTMCK EEHWKSSLWM SPTKFTYSQD EHSTNVQVPP FTLPSWNQFL SGDGTSDLLS
PTKNLLPAAA NPLYLPTSPY YSKSVIAPHP SELPLPSLSL TPKKKISVDN QKKTAARTHF
NLANSESEDN TVDDDESSDS HSTSSKLRE
//
