ID A0A0K9NYC6_ZOSMR Unreviewed; 1477 AA.
AC A0A0K9NYC6;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE SubName: Full=30S ribosomal protein S1 {ECO:0000313|EMBL:KMZ61801.1};
GN ORFNames=ZOSMA_4G00900 {ECO:0000313|EMBL:KMZ61801.1};
OS Zostera marina (Eelgrass).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Zosteraceae; Zostera.
OX NCBI_TaxID=29655 {ECO:0000313|EMBL:KMZ61801.1, ECO:0000313|Proteomes:UP000036987};
RN [1] {ECO:0000313|Proteomes:UP000036987}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Finnish {ECO:0000313|Proteomes:UP000036987};
RX PubMed=26814964; DOI=10.1038/nature16548;
RA Olsen J.L., Rouze P., Verhelst B., Lin Y.-C., Bayer T., Collen J.,
RA Dattolo E., De Paoli E., Dittami S., Maumus F., Michel G., Kersting A.,
RA Lauritano C., Lohaus R., Toepel M., Tonon T., Vanneste K., Amirebrahimi M.,
RA Brakel J., Bostroem C., Chovatia M., Grimwood J., Jenkins J.W.,
RA Jueterbock A., Mraz A., Stam W.T., Tice H., Bornberg-Bauer E., Green P.J.,
RA Pearson G.A., Procaccini G., Duarte C.M., Schmutz J., Reusch T.B.H.,
RA Van de Peer Y.;
RT "The genome of the seagrass Zostera marina reveals angiosperm adaptation to
RT the sea.";
RL Nature 530:331-335(2016).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMZ61801.1}.
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DR EMBL; LFYR01001430; KMZ61801.1; -; Genomic_DNA.
DR STRING; 29655.A0A0K9NYC6; -.
DR OMA; GQYLRAY; -.
DR OrthoDB; 167902at2759; -.
DR Proteomes; UP000036987; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 7.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR045209; Rrp5.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR23270; PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5; 1.
DR PANTHER; PTHR23270:SF10; PROTEIN RRP5 HOMOLOG; 1.
DR Pfam; PF00575; S1; 2.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 5.
DR SMART; SM00316; S1; 11.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 8.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50126; S1; 10.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000036987};
KW Ribonucleoprotein {ECO:0000313|EMBL:KMZ61801.1};
KW Ribosomal protein {ECO:0000313|EMBL:KMZ61801.1};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 58..125
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 145..214
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 229..300
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 320..389
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 433..497
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 621..695
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 721..792
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 820..894
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 932..1001
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1022..1092
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1184..1203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1477 AA; 164753 MW; 2C963F1E9A828E13 CRC64;
MSEVAEKQVL KLDKKFKEDS FVRVRVIGLR LVEGVAIGTL KTSAFEGSIF THSDVEPGML
ANAKVIAVEC FGAIVQFSCG VKALCPVSHM SEFEIAKPPK KYKNGAEFLF RVLGCKSKRL
TVTHKKTMVN SKLAVIASYS DAIEGLLTHG WIAKIETHGC FVRFYNGVNG FANRDELGME
PGSEPGALYH VGQVIKCKVL ASNPSSRKIN ITFNLSSKRT IESDCAKIGS LVAGTVQRIT
ADSVIVGVNS SHQIGKICNE HLADHYGHIT SLKVLLKPGY KFEQLLVLDD NGNNLTLSAK
HSLVMSSQTL PLDVTQIRQN SILHGYICNI IGTGCFVRFL GSLTGFSPLH RATDENISTL
RDAFYTGQSV RSKILNVNKD DNRITVSLKQ SSCFSTDASF IQGYFLLEDK ISEMQTLATG
SLQTSGAKLF RIGQLVEVEV QVEKEYGVVF SIKGHDNVVG FATQYHLCGK NLETGSFLKA
VVIDISEGEG LVDLSLKPEL LGSVIEKGAK KSSAKKKRQR DCDVNLELHK TVNAVIESVK
ENYLVLSIPE CNNAIGFASI FDYNTQKLPL KSFVEGQCVS VTIEAIPNSS SKRLLLLLKS
LSETSELSSK RAKKKSAYVA GSFLQAEITD IKPLELFVKF GNKCQGRIHI TEVNENDLSS
DCPLLNFRIG QVLSARVIAK PPKFGKEHMW ELSLKPLSLA GDGDGSDEVC QADADFNFSL
GQVVKGYVTQ VNNEWVSLMI TRWVHGQLFI LDSSCDPNEL QDFNNRYKVG DVVSGHVIYL
NPEKKLLRLV SRPLCFHKVE IDTKDASDST LNSAKHILEG DVVGGRIKKI LPGVAGMLVQ
IGPHLHGKVH YTELSDTWTN NPLSGYQEGQ FVKCNVLEIS HSLEGFMHVE LSLLNSLCEA
NSSGSVQSEK TSMTAVTVPL QRIIKIEELH PNMAVKGYVK HISSKGCFIM LSRKIDARVL
LSNLSHEYIQ NTEKEFPIGK LVVGRVLSVE QLSGRVEVTL KTGTKSQTSI SEVSDFGKLR
AGEIISGTIR RIESYGLFIT IDQTNMVGLC HISNISESLI ENIESNFKTG EKVQVKILKV
DQERNRISLG MKDLNCTQDI LAASTNFSDT LPDGNISSDD KLVDVPTFNF DKVQDIYVDQ
VEPHLRSSVP PLDVKLDDMS DSDFDDNPIV KVRDPCPVIA KVENSKKRSK KKEKEERELQ
VSASEERLLE NDVPRTSDEF EKLVRTSPDS SFVWIKYMAF LLSLADVEKA RSVAERALRI
INIREENEKM NIWVAYFNLE NEYGNPSEDA VRRIFARALQ YCEPKKLHFA LLGIYQRSEK
QSQVDELLEK MTKKFKNSCK VWLQYVQSHL KQNRDVQGVV KKALLCLSHH KHIKFISQAA
IIEFKFGSPD RGRSMFEGML REYPKRTDLW SVYLDQEIRL ADVEVIRALF ERVTCLSLPP
KKMKFLLKKY LEYEKSLGDE GKIEYVTSKA LEYASSI
//
