ID A0A0K9PJI7_ZOSMR Unreviewed; 752 AA.
AC A0A0K9PJI7;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=ZOSMA_221G00170 {ECO:0000313|EMBL:KMZ69106.1};
OS Zostera marina (Eelgrass).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Zosteraceae; Zostera.
OX NCBI_TaxID=29655 {ECO:0000313|EMBL:KMZ69106.1, ECO:0000313|Proteomes:UP000036987};
RN [1] {ECO:0000313|Proteomes:UP000036987}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Finnish {ECO:0000313|Proteomes:UP000036987};
RX PubMed=26814964; DOI=10.1038/nature16548;
RA Olsen J.L., Rouze P., Verhelst B., Lin Y.-C., Bayer T., Collen J.,
RA Dattolo E., De Paoli E., Dittami S., Maumus F., Michel G., Kersting A.,
RA Lauritano C., Lohaus R., Toepel M., Tonon T., Vanneste K., Amirebrahimi M.,
RA Brakel J., Bostroem C., Chovatia M., Grimwood J., Jenkins J.W.,
RA Jueterbock A., Mraz A., Stam W.T., Tice H., Bornberg-Bauer E., Green P.J.,
RA Pearson G.A., Procaccini G., Duarte C.M., Schmutz J., Reusch T.B.H.,
RA Van de Peer Y.;
RT "The genome of the seagrass Zostera marina reveals angiosperm adaptation to
RT the sea.";
RL Nature 530:331-335(2016).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMZ69106.1}.
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DR EMBL; LFYR01000789; KMZ69106.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0K9PJI7; -.
DR STRING; 29655.A0A0K9PJI7; -.
DR OMA; LLAMYYC; -.
DR OrthoDB; 1200549at2759; -.
DR Proteomes; UP000036987; Unassembled WGS sequence.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IBA:GO_Central.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08603; GDPD_SHV3_repeat_1; 1.
DR CDD; cd08604; GDPD_SHV3_repeat_2; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF32; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR PROSITE; PS51704; GP_PDE; 2.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000036987};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..25
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 26..752
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5005527771"
FT DOMAIN 43..341
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT DOMAIN 357..659
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT REGION 708..733
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 717..733
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 752 AA; 82009 MW; AF18A3C563ED6838 CRC64;
MWTLMSPLLA VVLLLLADSS RTVLAAGKSG KTSPWLTLHG NEPSVIAKGG MSGVFPDSSE
YAYSIAMQTS MPDVVLWCDV QLTKDGYGIC LPDVKLSNCT VIGSVYANQT KTYDINGESV
SGMFSVDYTL AQLSKVPLIQ GLYSRTEKFD GVLPILTVDY LESLKPPGVW LNIQHDLFYT
QHNLSMKNYL TSISRKSIIN YVSSPEVEFL KSINPLFKKT KTNLIFRFLG SNLIEPSTKQ
TYGSLLKNLT FVKTFASGII VPKDYIWPVT ADLYLLPYTS VVLDAHKMGL QVFASDFAND
ALIAYNYSYD PVSEYLNFVD NGKFSVDGVL TDYPITASEA IGCFSQIDKT KPGAEKPLII
SNNGASGVFP GCTDLAYKQA IEDGADIIDC PVQITKDGIL VCLPSMDLMI GTTVTTSSFS
TLSTIIPEIQ NGAGIFSFNL TWADIQKNLK PMISSPDFSG YKLLRSPENK NAGNFMTLKD
FLTFTKDKQL SGVLINIEHA AFQAENLGFS VTDSVLKELS DSGYDNRTSQ EVMIQSANSS
VLVAIKERSK YKLVYKIDEL ISDAISASIK DIKKFADSVA IMKESVFPKD LGFITSQTKL
VEKLQSAELS VYVYLLSNEF VTQAWDFFSD PAVQINNYIQ GASVDGIITD YPATASAYKK
NTCLKDSPPP NYMLPVQPGG LLSLMAASAL PPASAPFPSL KEADVLEPPL PPASLKSAGD
NETQLRNSKS DGQASTMSMG MLILMLSLVL LV
//
