ID A0A0L9TJV3_PHAAN Unreviewed; 877 AA.
AC A0A0L9TJV3;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:KAG2410276.1};
GN ORFNames=HKW66_Vig0009410 {ECO:0000313|EMBL:KAG2410276.1},
GN LR48_Vigan01g045300 {ECO:0000313|EMBL:KOM30898.1};
OS Phaseolus angularis (Azuki bean) (Vigna angularis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=3914 {ECO:0000313|EMBL:KOM30898.1, ECO:0000313|Proteomes:UP000053144};
RN [1] {ECO:0000313|Proteomes:UP000053144}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Jingnong 6 {ECO:0000313|Proteomes:UP000053144};
RX PubMed=26460024; DOI=10.1073/pnas.1420949112;
RA Yang K., Tian Z., Chen C., Luo L., Zhao B., Wang Z., Yu L., Li Y., Sun Y.,
RA Li W., Chen Y., Li Y., Zhang Y., Ai D., Zhao J., Shang C., Ma Y., Wu B.,
RA Wang M., Gao L., Sun D., Zhang P., Guo F., Wang W., Li Y., Wang J.,
RA Varshney R.K., Wang J., Ling H.Q., Wan P.;
RT "Genome sequencing of adzuki bean (Vigna angularis) provides insight into
RT high starch and low fat accumulation and domestication.";
RL Proc. Natl. Acad. Sci. U.S.A. 112:13213-13218(2015).
RN [2] {ECO:0000313|EMBL:KOM30898.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:KOM30898.1};
RA Chooi Y.-H.;
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAG2410276.1, ECO:0000313|Proteomes:UP000743370}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaf {ECO:0000313|EMBL:KAG2410276.1};
RA Xiang H.;
RT "Vigna angularis (adzuki bean) Var. LongXiaoDou No. 4 denovo assembly.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; JABFOF010000001; KAG2410276.1; -; Genomic_DNA.
DR EMBL; CM003371; KOM30898.1; -; Genomic_DNA.
DR RefSeq; XP_017411192.1; XM_017555703.1.
DR AlphaFoldDB; A0A0L9TJV3; -.
DR EnsemblPlants; KOM30898; KOM30898; LR48_Vigan01g045300.
DR GeneID; 108323267; -.
DR Gramene; KOM30898; KOM30898; LR48_Vigan01g045300.
DR KEGG; var:108323267; -.
DR OMA; ACANVGK; -.
DR OrthoDB; 364303at2759; -.
DR Proteomes; UP000053144; Chromosome 1.
DR Proteomes; UP000743370; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000053144};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 167..201
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 268..302
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 369..403
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 470..500
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 570..604
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 786..877
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 877 AA; 98285 MW; 313C4D23BDBB6A0B CRC64;
MSKTRSVAPL NAYPTYHNPR NKTNHPKSPN YFILFRQSWT CLPPPNFVLS CSSSVVVSAT
LSKPTYNVAI DKNAQIRKFC QTGDLRKAME LLKISQMSEL ELQTYCSVLQ LCAELKSLED
GKRVHSIIIS NGMEIDDILG AKLVFMYVHC DDLAAGRQIL DGIINDKIYL WNFLMSKYAK
IGNYEEAVSL IRKMQKLGIR GDPFTFTCIL KCYTALAKIR ACKSVHGYAF KLGFGSDNTV
INSLIAAYFK CRDVESAHNM FDELSEPDVV SWNSMISGCV LNGFSWDGLE FFIQMLNFGF
GMELVTLVNV LVACANVGKL SFGRALHTCG VKTGYSGDVV FDNTLLDMYS KCGYLKGATD
VFSKMSKTSV VSWTSMISAY VRKGLYDEAI ILFEEMQSKG LKPDVYTVSS VVHACACSNS
LDKGRNIHNF IKKNNIGLNL PVFNALMYMY AKCGVMEEAR LIFSQIPVKD IVSWNTMIGG
YSQNSLPYEA LELFVDMQKQ LKPNSITVAC VLPACAGLAA LEKGRELHGH ILRKGYFSDL
QVACALVDMY VKCGLVVIAQ QLFDMIPKKD IILWTVMIAG YGMHGFGKEA VSTFEKMRIA
GIQPEDSCFT SILYACSHSG LLKEGWKFFS SMRSEFNIEP KLEHYACMVD LLVRSGNLSK
AYKFIETMPI KPDAAIWGAL LSGCGIHHDV ELAEKVAEHI FELEPENTKY YVLLANVYAE
AEKLEEVKKL QRKIGKGGFK KDQGCSWIDI QGKFNIFVAG DTSHPQAKRI DSLLRKLRMK
MNRVDYSNKM RFALINADDM NKEVLLCGHS ETLAMAFGVL NLPPGKIVRV TKNLRVCKDC
HDMGKLMSKT TGRDIVLRDS NRFHHFKDGV CSCRGFW
//
