GenomeNet

Database: UniProt
Entry: A0A0M0JBP4_9EUKA
LinkDB: A0A0M0JBP4_9EUKA
Original site: A0A0M0JBP4_9EUKA 
ID   A0A0M0JBP4_9EUKA        Unreviewed;      1807 AA.
AC   A0A0M0JBP4;
DT   11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT   11-NOV-2015, sequence version 1.
DT   27-SEP-2017, entry version 10.
DE   SubName: Full=Sodium channel protein type 2 subunit alpha {ECO:0000313|EMBL:KOO23915.1};
GN   ORFNames=Ctob_007596 {ECO:0000313|EMBL:KOO23915.1};
OS   Chrysochromulina sp. CCMP291.
OC   Eukaryota; Haptophyceae; Prymnesiales; Chrysochromulinaceae;
OC   Chrysochromulina.
OX   NCBI_TaxID=1460289 {ECO:0000313|EMBL:KOO23915.1, ECO:0000313|Proteomes:UP000037460};
RN   [1] {ECO:0000313|Proteomes:UP000037460}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CCMP291 {ECO:0000313|Proteomes:UP000037460};
RX   PubMed=26397803; DOI=10.1371/journal.pgen.1005469;
RA   Hovde B.T., Deodato C.R., Hunsperger H.M., Ryken S.A., Yost W.,
RA   Jha R.K., Patterson J., Monnat R.J. Jr., Barlow S.B.,
RA   Starkenburg S.R., Cattolico R.A.;
RT   "Genome Sequence and Transcriptome Analyses of Chrysochromulina tobin:
RT   Metabolic Tools for Enhanced Algal Fitness in the Prominent Order
RT   Prymnesiales (Haptophyceae).";
RL   PLoS Genet. 11:e1005469-e1005469(2015).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU003808};
CC       Multi-pass membrane protein {ECO:0000256|RuleBase:RU003808}.
CC   -!- SIMILARITY: Belongs to the calcium channel alpha-1 subunit
CC       (TC 1.A.1.11) family. {ECO:0000256|RuleBase:RU003808}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KOO23915.1}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; JWZX01003145; KOO23915.1; -; Genomic_DNA.
DR   Proteomes; UP000037460; Unassembled WGS sequence.
DR   GO; GO:0005891; C:voltage-gated calcium channel complex; IEA:InterPro.
DR   GO; GO:0005245; F:voltage-gated calcium channel activity; IEA:InterPro.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR002077; VDCCAlpha1.
DR   Pfam; PF00520; Ion_trans; 4.
DR   PRINTS; PR00167; CACHANNEL.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|RuleBase:RU003808};
KW   Calcium channel {ECO:0000256|RuleBase:RU003808};
KW   Calcium transport {ECO:0000256|RuleBase:RU003808};
KW   Complete proteome {ECO:0000313|Proteomes:UP000037460};
KW   Ion channel {ECO:0000313|EMBL:KOO23915.1};
KW   Ion transport {ECO:0000256|RuleBase:RU003808};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000037460};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|RuleBase:RU003808};
KW   Voltage-gated channel {ECO:0000256|RuleBase:RU003808}.
FT   TRANSMEM     94    118       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    169    190       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    262    281       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    384    401       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    413    438       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    533    557       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    638    657       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    736    764       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    882    905       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    925    945       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1017   1041       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1217   1239       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1300   1318       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1338   1355       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1367   1389       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1438   1460       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1594   1617       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       89    447       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   DOMAIN      487    769       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   DOMAIN      885   1248       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   DOMAIN     1297   1625       Ion_trans. {ECO:0000259|Pfam:PF00520}.
SQ   SEQUENCE   1807 AA;  204345 MW;  B6772A9562397D1F CRC64;
     MEEPVEAARL ADDEPDTSDA AAAAASVATG HQDSPRSEAS GRGIMEMVAK IATGGERLTD
     EKYAPKAWIF LHRDRFPRKQ CIAIIENVWF DRCVLALIGL NCLTMVLFAS PLVASVLAND
     DGVDYRDIEQ KSAWVARHWT FELLKPLRDQ GNCGLGDRIP CSFSQIVDFV FLLFFAIEMV
     IKMLALGLAL HKNAYLRSGW NWLDFVVVVV GFLEQFSGGD LPGISTIRLV KTFRPLRSMQ
     RIRGLRVLVQ TILEALPQML NVAIFLVFVL IIFGLFGMAF FSGKLRHACH ACAEYDEAGE
     CLEWESTGIR CDAECQWDDD IRLVKACGSL GNGTMQKESQ ARNLRWTYSC RPGERCLCDD
     SGEALPGCSY LANPNYGITS FDSILWAMLS LFQAISLEGW IDMTYQLMDG CSMFVFIYFI
     VLVLIGAIIA MNLFLAVLCD NFDKADSDDT NPMSDEESSE EVLARQLMQM KHSNIIRQRC
     LDVIRFKYFD YFIQGCILLN TLLMCLKVAP QPANLVAMDI HTIPRWDYLP EPYFWFLTIF
     NIILTLVFVA ELVLKMVALG WRLFLRDSMN LFDAFVVFFS IVELALDLSE RFSTGGAVIP
     LPLSVLRAFR IFRLFKLVRT IDSLRKIIST LIQSFKEVFY LALLLLLVML IFILLGVELF
     GGMYPHSEYN YTQDNFPGTW DKRMILWEDD ASRYNFDDFG TALLAIFVVL SGENWNEIMF
     NNHEATWSKD VAAVPFIPWA VIYMVILFIV GNLLLFNLFV AILLSNFDDD DDFADAEEDE
     DARNEAMEDD IGDSKAAKAR KQKPEEVEYK FGEYRLKSVA RRGSVVGDAG GVDDDDKGED
     EEVPEAQIVI EAYPKSVTDG GGDKSLMIFG WDNPVRIVCC RIILHPVFEP VVLVLILVST
     LTLVIDMPHL DYKSPLRSGI EKLNTVFTVL FTLEMALKMV ACGLYKSKTP PKYTLHMPYF
     ASSWNILDFF IVLVTILSDV LDPAEQPWIN QLRTFRAIRP LRLVSRYEAL KVTCSTLLAA
     IPAMASLATV AILFFLIFGI LGTELFGGKF GYCYDPLYAD LEFGGRITPG LGMGPHAHQG
     ANTDYHECMA LPRYNLTRRT TDGILLMDMA DIEPGTLSDG SKWLNFIEFP QWVYPSFGNF
     DNIGYSFILL FEVSALEGWP DVMHWAMDVD SNEMYVQPWR IDSNPMEWMA SDTPVPEELL
     PSIPSHKHTT ANIEGGAFFV LWIIFGCFVI VNLTVGIVVD TFSDIKAKND GLLNMTEDQA
     DWVLAQKQLL TQRPLKAATQ PAQLWRHNFY YLVTSTRFEV FIMVVIMMNM TFMACDWFEP
     NPDAQIYIPQ LKHTMKVVDA VFFFIYVAEM LLKWVGLGFD QYFKDSWCVF DCILVTISAV
     DFIFTWIVVD GKMPFPAAVA RCLRLFRVAR ILRIVKTAKS LRVIMLTVYL SLPQLYNIMI
     LITLIILITD MLLVGFFWFV NYTPGNFDTS DHLDWTVTQS YRKGERYFQD DWHLDNTPGT
     NWGSALDRHA NFGFFWTGAL TLVRSSTGES FNLVMHDLYG WWWGINRLTC CPECGPMINS
     TSPLKQESIR IPSTGAEIWR QIPMTSCGAT EPGMLIYLVF QVLMAYVVLS IMVGVILENF
     ANVGSENKRI KMEDIEDFRE VWLKYDPKGT FIVPSHNLLA MLQQLREPLG IQGKTHGPTH
     GSPGGHLTRA DMLKHLGELD IPDHGGYIHF LETLTALSNK HAGCALPLVP TTEKLLKANK
     QAVLKGGSKL DPPKHSALTN YLVSLLQSRW RGYAMRIQGD EMLASDETAK LGTVKIKASQ
     VAPLPPL
//
DBGET integrated database retrieval system