ID A0A0M2RCF5_9PROT Unreviewed; 563 AA.
AC A0A0M2RCF5;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=WH95_09560 {ECO:0000313|EMBL:KKJ77268.1};
OS Kiloniella litopenaei.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales;
OC Kiloniellaceae; Kiloniella.
OX NCBI_TaxID=1549748 {ECO:0000313|EMBL:KKJ77268.1, ECO:0000313|Proteomes:UP000034491};
RN [1] {ECO:0000313|EMBL:KKJ77268.1, ECO:0000313|Proteomes:UP000034491}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P1-1 {ECO:0000313|EMBL:KKJ77268.1,
RC ECO:0000313|Proteomes:UP000034491};
RA Shao Z., Wang L., Li X.;
RT "Genome sequence of Kiloniella sp. P1-1, isolated from the gut microflora
RT of Pacific white shrimp, Penaeus vannamei.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KKJ77268.1}.
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DR EMBL; LANI01000005; KKJ77268.1; -; Genomic_DNA.
DR RefSeq; WP_046506036.1; NZ_LANI01000005.1.
DR AlphaFoldDB; A0A0M2RCF5; -.
DR STRING; 1549748.WH95_09560; -.
DR PATRIC; fig|1549748.8.peg.3937; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000034491; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 5.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF13; 30S RIBOSOMAL PROTEIN S1; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000034491};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:KKJ77268.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 25..91
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 109..175
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 196..264
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 281..351
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 368..438
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 455..524
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 563 AA; 61242 MW; 1CF30ECAEF6536A8 CRC64;
MAEAATESFA DLLDESLGQS DRLEGNVLKG MIVAIEGDVA LVDVGLKSEG RVALKEFADA
GQAPEVKVGD EVEVYLERME SKNGDVMVSR DKAKREEAWT QLEKSFGDNE RVNGVIFGRV
KGGFTVDLSG AVAFLPGSQV DIRPVRDVSP LMGNAQPFQI LKMDRARGNI VVSRRAVLEE
TRAEQRSELI QNLNEGQVLQ GVVKNITDYG AFVDLGGVDG LLHVTDISWK RINHPSEKLT
IGQQVDVQVI RFNAETQRIS LGMKQLETDP WDGVAAKYPM GAKLEGRVTN ITDYGAFVEL
EAGIEGLVHV SEMSWTKKNI HPGKIVSTSQ EVAVMVLDVD ESKRRISLGL KQCSSNPWES
FQANHPAESE LEGEIKNITE FGLFVGLPGE IDGMVHLSDL NWELSGDEAV KEYNKGDMVK
VKVLDVDVDK ERISLGIKQL SSDPFAGSVE GLKKGAVVTC TITAVTDGAL EVQIADGATG
TIRKTELSRE RSEQRTDRFA VGEKIDARIT NIDSKSRKIA LSIKQHEAAE EKQAMADYGS
TDSGASLGDI LGEALSKAAE DKK
//
