ID A0A0M9EI66_9RHOB Unreviewed; 343 AA.
AC A0A0M9EI66;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Ribose operon repressor {ECO:0000313|EMBL:KPA21829.1};
GN Name=rbsR {ECO:0000313|EMBL:KPA21829.1};
GN ORFNames=shim_17140 {ECO:0000313|EMBL:KPA21829.1};
OS Shimia sp. SK013.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae.
OX NCBI_TaxID=1389006 {ECO:0000313|EMBL:KPA21829.1, ECO:0000313|Proteomes:UP000037951};
RN [1] {ECO:0000313|EMBL:KPA21829.1, ECO:0000313|Proteomes:UP000037951}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SK013 {ECO:0000313|EMBL:KPA21829.1,
RC ECO:0000313|Proteomes:UP000037951};
RA Voget S., Kanukollu S., Daniel R., Engelen B.;
RT "Genome Sequence of Shimia sp. SK013.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPA21829.1}.
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DR EMBL; LAJH01000011; KPA21829.1; -; Genomic_DNA.
DR RefSeq; WP_054002210.1; NZ_LAJH01000011.1.
DR AlphaFoldDB; A0A0M9EI66; -.
DR STRING; 1389006.shim_17140; -.
DR PATRIC; fig|1389006.3.peg.1759; -.
DR OrthoDB; 9805705at2; -.
DR Proteomes; UP000037951; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF152; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000037951};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 7..61
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
FT DOMAIN 9..51
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 343 AA; 38065 MW; EB8E8248C11B86F5 CRC64;
MKEPKIKNME EFAAVSGISR PTLSKYFNNP SSVRRSTRSR IEGALEKFDY QPNFYAMNQN
RRLTKNIGIV IPYMADPFFA EIARNVENLV LEAGYRPILL GSHGDPYQEI ENLENLRVIK
PAGVLLAPLG RVSDPERLSA FCADVPTVLF DANIETVGEA FVGSDNNQSV GIMVDYLCET
GEPPAFFEMK SPSNPNALKR RSAYVHAMNT LGHVPHLIQV PGEGWDFEEI GFQNGTRAIS
ERNLPSDTIL CSNDRLAIGF LSAAFQLGLR VGSGPGNALR VAGHDDHPFS RYTCPTLTTV
SQNYEAIARK SAQTLFEMIE SDARPIRRVE TLLEGKLIRR ESA
//
