ID A0A0M9EK42_9RHOB Unreviewed; 339 AA.
AC A0A0M9EK42;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:KPA23346.1};
GN Name=cytR_1 {ECO:0000313|EMBL:KPA23346.1};
GN ORFNames=shim_04130 {ECO:0000313|EMBL:KPA23346.1};
OS Shimia sp. SK013.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae.
OX NCBI_TaxID=1389006 {ECO:0000313|EMBL:KPA23346.1, ECO:0000313|Proteomes:UP000037951};
RN [1] {ECO:0000313|EMBL:KPA23346.1, ECO:0000313|Proteomes:UP000037951}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SK013 {ECO:0000313|EMBL:KPA23346.1,
RC ECO:0000313|Proteomes:UP000037951};
RA Voget S., Kanukollu S., Daniel R., Engelen B.;
RT "Genome Sequence of Shimia sp. SK013.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPA23346.1}.
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DR EMBL; LAJH01000007; KPA23346.1; -; Genomic_DNA.
DR RefSeq; WP_054000968.1; NZ_LAJH01000007.1.
DR AlphaFoldDB; A0A0M9EK42; -.
DR STRING; 1389006.shim_04130; -.
DR PATRIC; fig|1389006.3.peg.425; -.
DR OrthoDB; 234496at2; -.
DR Proteomes; UP000037951; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06273; PBP1_LacI-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF152; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00036; HTHLACI.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000037951};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..62
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 339 AA; 37270 MW; 920C555E03FB51DA CRC64;
MEKNRRAPTL SDVARTANVS TATVSRCLNS PDRVVEKTRK RVMEVVELLG YTPNFAARVM
AANRSFTIGA IIPTMDNAIF ARGLQAFQDQ LRDQGYTLLV SSSAYKPDVE EEQIRALVAR
GADGLLLIGH ERRSEIYDYL KQHQVPTLVA WSHLPEADLP SIGFDNRSSM ASLARKVIQE
GHSEIAMISG VLTGNDRATR RKNGVEDALR EHGLEANHIN IVETPYGIEH GEAAFRELMS
RATRPTAVLC GNDVLAVGAL RAAQALGLRV PEDVSITGFD DIELAEIVNP ALTTVHVPHR
EMGRKAASEL IEMVEGKSEG RTICIDTYIV RRQSLAPPR
//
