ID A0A0N0D8L0_9RHOB Unreviewed; 338 AA.
AC A0A0N0D8L0;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=HTH-type transcriptional regulator GntR {ECO:0000313|EMBL:KPA21218.1};
GN Name=gntR_2 {ECO:0000313|EMBL:KPA21218.1};
GN ORFNames=shim_26830 {ECO:0000313|EMBL:KPA21218.1};
OS Shimia sp. SK013.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae.
OX NCBI_TaxID=1389006 {ECO:0000313|EMBL:KPA21218.1, ECO:0000313|Proteomes:UP000037951};
RN [1] {ECO:0000313|EMBL:KPA21218.1, ECO:0000313|Proteomes:UP000037951}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SK013 {ECO:0000313|EMBL:KPA21218.1,
RC ECO:0000313|Proteomes:UP000037951};
RA Voget S., Kanukollu S., Daniel R., Engelen B.;
RT "Genome Sequence of Shimia sp. SK013.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPA21218.1}.
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DR EMBL; LAJH01000013; KPA21218.1; -; Genomic_DNA.
DR RefSeq; WP_054003130.1; NZ_LAJH01000013.1.
DR AlphaFoldDB; A0A0N0D8L0; -.
DR STRING; 1389006.shim_26830; -.
DR PATRIC; fig|1389006.3.peg.2766; -.
DR OrthoDB; 7170131at2; -.
DR Proteomes; UP000037951; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01575; PBP1_GntR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF33; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF00532; Peripla_BP_1; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000037951};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..62
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 338 AA; 36476 MW; C93433600D72E08A CRC64;
MTQNNRSLTL RDVSEASGVS EMTVSRVLRN RGDVSATTRE KVLSAAKELG YVPNKIAGAL
ASQRVNLVAV IIPSLSNMVF PEVLAGVSQV LEDTELQPVV GVTDYLPEKE EKVLYEMLSW
RPSGVIIAGL EHTEAARAMM NASGIPVVEI MDADGEAVDA MVGISHRRAG RVMAASILEA
GYKKIAFLGT KMPLDHRARK RFEGFTETLA KSGIEVAERE FYSGGSALAK GREMTQAVLE
RSPDIDFIYY SNDMIGAGGL LYLMEKGIDV PGQIGLAGFN GVELLQGLPR RLATMDACRR
EIGVKAAEII AASVNDNVTE KSVTLTPKIS FGDTLLRK
//
