ID A0A0N0E2L4_9PSED Unreviewed; 561 AA.
AC A0A0N0E2L4;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=PF66_04692 {ECO:0000313|EMBL:KPA89010.1}, SAMN05216581_5184
GN {ECO:0000313|EMBL:SEI23473.1};
OS Pseudomonas fuscovaginae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=50340 {ECO:0000313|EMBL:KPA89010.1, ECO:0000313|Proteomes:UP000037931};
RN [1] {ECO:0000313|EMBL:KPA89010.1, ECO:0000313|Proteomes:UP000037931}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRRI 6609 {ECO:0000313|EMBL:KPA89010.1,
RC ECO:0000313|Proteomes:UP000037931};
RX PubMed=26422147;
RA Quibod I.L., Grande G., Oreiro E.G., Borja F.N., Dossa G.S., Mauleon R.,
RA Cruz C.V., Oliva R.;
RT "Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor
RT Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot.";
RL PLoS ONE 10:E0139256-E0139256(2015).
RN [2] {ECO:0000313|EMBL:SEI23473.1, ECO:0000313|Proteomes:UP000182272}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 2158 {ECO:0000313|EMBL:SEI23473.1,
RC ECO:0000313|Proteomes:UP000182272};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
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DR EMBL; JSYZ01000018; KPA89010.1; -; Genomic_DNA.
DR EMBL; LT629972; SEI23473.1; -; Genomic_DNA.
DR RefSeq; WP_010449734.1; NZ_LT629972.1.
DR STRING; 50340.PF66_04692; -.
DR PATRIC; fig|50340.43.peg.1992; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000037931; Unassembled WGS sequence.
DR Proteomes; UP000182272; Chromosome i.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05689; S1_RPS1_repeat_ec4; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 5.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:KPA89010.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 21..89
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 107..173
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 194..262
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 279..349
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 366..436
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 453..522
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 561 AA; 61967 MW; DF215DF136945277 CRC64;
MSESFAELFE ESLKTLNLQA GSIITGVIVD IDYQARWVTV HAGLKSEALI PLEQFYTDAG
ELNINVGDEV HVALDSVEDG FGETKLSREK AKRAECWIVL EAAFAAEEVV KGVINGKVKG
GFTVDVNGIR AFLPGSLVDV RPVRDTTHLE GKELEFKVIK LDQKRNNVVV SRRSVLEAEN
SAEREALLES LQEGQQVKGI VKNLTDYGAF VDLGGVDGLL HITDMAWKRI KHPSEIVNVG
DEIDVKVLKY DRERNRVSLG LKQLGEDPWV AIKARYPEST RVTARVTNLT DYGCFAELEE
GVEGLVHVSE MDWTNKNIHP SKVVQVGDEV EVMVLDIDEE RRRISLGIKQ CKSNPWEDFS
GQFNKGDKIS GTIKSITDFG IFIGLDGGID GLVHLSDISW NEVGEEAVRR FKKGDELDTV
ILSVDPERER ISLGIKQLES DPFSEYVSVN DKGAVVKGTV KEVDAKGAII VLADDIEATL
KASEISRDRV EDARNVLKEG EEVEAKIISV DRKSRVIQLS IKSKDVEDEK EAIQSLKAAP
EGEAADTTMA ALLRQAMAKQ N
//
