ID A0A0N1LHC1_9PROT Unreviewed; 574 AA.
AC A0A0N1LHC1;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=IP88_03815 {ECO:0000313|EMBL:KPF78447.1};
OS alpha proteobacterium AAP81b.
OC Bacteria; Pseudomonadota; Alphaproteobacteria.
OX NCBI_TaxID=1523432 {ECO:0000313|EMBL:KPF78447.1, ECO:0000313|Proteomes:UP000037971};
RN [1] {ECO:0000313|EMBL:KPF78447.1, ECO:0000313|Proteomes:UP000037971}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AAP81b {ECO:0000313|EMBL:KPF78447.1,
RC ECO:0000313|Proteomes:UP000037971};
RA Zeng Y., Feng F., Liu Y., Koblizek M.;
RT "Novel Diversity of Limnic Aerobic Anoxygenic Phototrophic Bacteria as
RT Revealed by High-throughput Strain Identification and Genome Sequencing.";
RL Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPF78447.1}.
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DR EMBL; LJHX01000033; KPF78447.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0N1LHC1; -.
DR STRING; 1523432.IP88_03815; -.
DR PATRIC; fig|1523432.3.peg.1933; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000037971; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 5.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000037971};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:KPF78447.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 28..94
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 112..178
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 199..267
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 284..354
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 371..441
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 464..533
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 574 AA; 62807 MW; 1EE3FE2F46815763 CRC64;
MASLAQPTRD DFAAMLESSL GKNQSFEGRV VRGIVTGIEN DLAVIDVGLK SEGRVPLREF
AGLDGKHNIS VGDEVEVYVD RVENANGEAM LSRDRARREA SWDTLEAQFA AAERVEGVIF
GRVKGGFTVD LNGAVAFLPG SQVDIRPVRD VTPLMNLPQP FQILKMDRKR GNIVVSRRAI
LEESRAEQRT GLISSLAEGQ IVDGTVKNIT DYGAFVDLGG IDGLLHVTDM SYKRVNHPSE
VLNIGDVLRV QIVRINRETQ RISLGMKQLE ADPWTTASQK YSVGSRHKGR VTNITEYGAF
VELEAGIEGL VHVSEMSWVK KNVHPGKIVS TSQEVEVIVL EVDDDKRRIS LGLKQAQRNP
WEVFAEQHPV GSDLEGEVKN ATEFGLFIGL DGEVDGMVHM SDIAWGLTGE AALSRHHKGE
RVRARVLEID IEKERISLGI KQMEEGPARV ITTPTAGGTG LNKNEIVTAT VVTARDGGID
VQLGDDGPVV FIKRGDLSRD RDEQRAERFQ PGQKVDAMVI GFEKGRRPML SIKAMQISEE
KEAVAQYGTS DSGATLGNIL GAAFNKARED ADKN
//
