ID A0A0N1LMR6_9SPHN Unreviewed; 901 AA.
AC A0A0N1LMR6;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Diguanylate cyclase {ECO:0000313|EMBL:KPF85953.1};
GN ORFNames=IP83_08230 {ECO:0000313|EMBL:KPF85953.1};
OS Novosphingobium sp. AAP93.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1523427 {ECO:0000313|EMBL:KPF85953.1, ECO:0000313|Proteomes:UP000037906};
RN [1] {ECO:0000313|EMBL:KPF85953.1, ECO:0000313|Proteomes:UP000037906}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AAP93 {ECO:0000313|EMBL:KPF85953.1,
RC ECO:0000313|Proteomes:UP000037906};
RA Zeng Y., Feng F., Liu Y., Koblizek M.;
RT "Novel Diversity of Limnic Aerobic Anoxygenic Phototrophic Bacteria as
RT Revealed by High-throughput Strain Identification and Genome Sequencing.";
RL Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPF85953.1}.
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DR EMBL; LJHZ01000039; KPF85953.1; -; Genomic_DNA.
DR RefSeq; WP_054121721.1; NZ_LJHZ01000039.1.
DR AlphaFoldDB; A0A0N1LMR6; -.
DR STRING; 1523427.IP83_08230; -.
DR PATRIC; fig|1523427.4.peg.2449; -.
DR OrthoDB; 9814202at2; -.
DR Proteomes; UP000037906; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0035438; F:cyclic-di-GMP binding; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 2.40.10.220; predicted glycosyltransferase like domains; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR009875; PilZ_domain.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF07238; PilZ; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF141371; PilZ domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transferase {ECO:0000256|ARBA:ARBA00022676};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 86..105
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 117..139
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 146..165
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 185..210
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 233..285
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 391..524
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 533..784
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 901 AA; 98218 MW; 21A55509866B132A CRC64;
MSQPTGDPAA LQAEPTRAVR DFARTQRRRD RVPTAPISRA DVAGGTFLFG TGPGRGLIAR
EWPHMALPMV LGVLGLALAN FSVRPIIAPL LALLASALLF VARFTSAYEE SRDHPTIVRM
ALMAASIGIP LFIYGYAIGM WASSGVVPWV QALALLVTIS LLATVTESGR LAGMLTAEVA
MWSGVTWVTH FAGGILSLVI GGVIAVAAYL RQREIDLKVR IAVEEGVRIQ TRAEEILADY
EETGQGWFWE TDRRGLITYI SRPVAHVLGR KVDEIIGRPF AELFNLSEQS GEGERTLAFH
LSARSSFSEL AVRAAVYDEE RWWSVTGRPT YDAFNNFQGF RGSGTDLTEK RRSQEHASRL
AHFDSLTGLS NRFQMSQTLE KILTAPNEQN RACAVFLLDL DRFKQVNDTL GHPAGDALLK
QVAQRLERVI GTVGRVGRLG GDEFQVILAG KIAREQLAHL AERIIETLSQ SYSIENSRVM
IGASVGIALA PDDGVTSEAL IRNADLALYA AKDAGRGRYH FYAADLHSDA EERRQLEEDL
RDAITHGNLE LYYQPVVQTA TERITGFEAL LRWNHPVHGF ISPAKFVPIA EDAGLIVSIG
EWALRTACQD LAQWPDDVRV AVNVSPLQFA NPALPSMVTS ALASAAVHPD RLELEITESV
FLGDDKATEA MFRALKGIGV RLALDDFGTG YSSLGYLKRA PFDKIKIDQS FVRGATQAGS
RNGAIIASIV SLAEALGMET TAEGVETLDE LDLVRMLGCS HVQGYIYERP LSASATQSRL
ATGLMAIARG PRSARASRQA MLRRVVLDHG GHRYNGTVRN MSLTGALIEG LWNVPPGTIF
RIQLSDGHTV TATCRWASDD RMGVEFSQPL RLDDDGRIAA VAIRSILAPL PDPAANQRKV
G
//
