ID A0A0N5AKI6_9BILA Unreviewed; 401 AA.
AC A0A0N5AKI6;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=RRM domain-containing protein {ECO:0000313|WBParaSite:SMUV_0000501101-mRNA-1};
OS Syphacia muris.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Spirurina; Oxyuridomorpha; Oxyuroidea; Oxyuridae; Syphacia.
OX NCBI_TaxID=451379 {ECO:0000313|Proteomes:UP000046393, ECO:0000313|WBParaSite:SMUV_0000501101-mRNA-1};
RN [1] {ECO:0000313|WBParaSite:SMUV_0000501101-mRNA-1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (FEB-2017) to UniProtKB.
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DR AlphaFoldDB; A0A0N5AKI6; -.
DR STRING; 451379.A0A0N5AKI6; -.
DR WBParaSite; SMUV_0000501101-mRNA-1; SMUV_0000501101-mRNA-1; SMUV_0000501101.
DR Proteomes; UP000046393; Unplaced.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IEA:InterPro.
DR GO; GO:0005688; C:U6 snRNP; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR CDD; cd01727; LSm8; 1.
DR CDD; cd21608; RRM2_NsCP33_like; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR034103; Lsm8.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR048289; RRM2_NsCP33-like.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR48033; RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN; 1.
DR PANTHER; PTHR48033:SF20; RNA-BINDING PROTEIN SQUID; 1.
DR Pfam; PF01423; LSM; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS50102; RRM; 2.
DR PROSITE; PS52002; SM; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 316..335
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 39..116
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 120..197
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 334..401
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 177..208
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 401 AA; 43694 MW; 98967616E9C76D2A CRC64;
MDSQQDSQQE SQNQNGIATN GGEDISNSNI TTGKGNEDKK IFVGGIAYDV TNDDLSSYFS
QFGEVVQAQV KYDRNTGRSR GFAFVEFTTG EACKSALSVR DQSLKNKQIE VKPAKSRENK
KVFVGGLPAD HPENELRAYF EKFGKVEDIE WPYDRQTKAR RNFAFIVFEE EEAADRASAT
PKQSFGGREC DVKKAVPQGK RFPGGRGGAA MRGGFGAGRG GVMNGWFGQA GWQMGAMGPY
GGAAGNGGWG DWYGSAAANY YQQSVGAGNY AGYGTGYDAY SQTTTNQRGG NQQRIVEGEW
VCHNVCVAFV KADCAAFAWS LTTLLVVFLF FIVLMTQSLE SFMNKVISVI TGDGRNIVGL
MKGFDQTINL VLEDSHERVF SEESGVEQIP LGLYIVRGDN V
//
