ID A0A0N7JCX7_9CREN Unreviewed; 395 AA.
AC A0A0N7JCX7;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Radical SAM domain containing protein {ECO:0000313|EMBL:ALL00625.1};
DE SubName: Full=Radical SAM/SPASM domain-containing protein {ECO:0000313|EMBL:OWJ54082.1};
GN ORFNames=Pdsh_09480 {ECO:0000313|EMBL:OWJ54082.1}, Pyrde_0575
GN {ECO:0000313|EMBL:ALL00625.1};
OS Pyrodictium delaneyi.
OC Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Pyrodictiaceae;
OC Pyrodictium.
OX NCBI_TaxID=1273541 {ECO:0000313|EMBL:ALL00625.1, ECO:0000313|Proteomes:UP000058613};
RN [1] {ECO:0000313|EMBL:ALL00625.1, ECO:0000313|Proteomes:UP000058613}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Su06 {ECO:0000313|EMBL:ALL00625.1,
RC ECO:0000313|Proteomes:UP000058613};
RA Jung J.-H., Lin J., Holden J.F., Park C.-S.;
RT "Complete genome sequence of hyperthermophilic archaeon Pyrodictium
RT delaneyi Su06.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:OWJ54082.1, ECO:0000313|Proteomes:UP000196694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hulk {ECO:0000313|EMBL:OWJ54082.1,
RC ECO:0000313|Proteomes:UP000196694};
RA Demey L.M., Miller C., Manzella M., Reguera G., Kashefi K.;
RT "The draft genome of the hyperthermophilic archaeon 'Pyrodictium delaneyi
RT strain Hulk', an iron and nitrate reducer, reveals the capacity for sulfate
RT reduction.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
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DR EMBL; CP013011; ALL00625.1; -; Genomic_DNA.
DR EMBL; NCQP01000007; OWJ54082.1; -; Genomic_DNA.
DR RefSeq; WP_055408059.1; NZ_NCQP01000007.1.
DR AlphaFoldDB; A0A0N7JCX7; -.
DR STRING; 1273541.Pyrde_0575; -.
DR GeneID; 26098911; -.
DR KEGG; pdl:Pyrde_0575; -.
DR PATRIC; fig|1273541.4.peg.624; -.
DR OrthoDB; 30736at2157; -.
DR Proteomes; UP000058613; Chromosome.
DR Proteomes; UP000196694; Unassembled WGS sequence.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd01335; Radical_SAM; 1.
DR Gene3D; 3.20.20.70; Aldolase class I; 1.
DR InterPro; IPR023885; 4Fe4S-binding_SPASM_dom.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR InterPro; IPR017200; PqqE-like.
DR InterPro; IPR007197; rSAM.
DR NCBIfam; TIGR04085; rSAM_more_4Fe4S; 1.
DR PANTHER; PTHR11228:SF7; PQQA PEPTIDE CYCLASE; 1.
DR PANTHER; PTHR11228; RADICAL SAM DOMAIN PROTEIN; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR Pfam; PF13186; SPASM; 1.
DR PIRSF; PIRSF037420; PQQ_syn_pqqE; 1.
DR SFLD; SFLDG01386; main_SPASM_domain-containing; 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR SMART; SM00729; Elp3; 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691}.
FT DOMAIN 32..255
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
SQ SEQUENCE 395 AA; 44638 MW; C88C4F1494DFC0AB CRC64;
MIPVTVMVAG KGTVSTRIKG HYGPRRPSKF SDVLRPIVFW NITYQCNLKC AHCYINALQN
KLPKELSTEE ARRLSQEMVE IGIPLVVVTG GEPLVRDDFW DIMEPMANKQ RPRLSLSTNG
TLITRDVAEK LASYGFVYVG ISIDSVKPGW HDKFRGVEGA FEATLRGIKN SIDAGIDVGI
RTTITRYNVK EVPEILRWSY DMGIKRISLY ILDTVGRGTG IKDWLPTHDQ LKWLADVLID
EARKYADAME ILIVRGQFMG IYIADKISRT NEEFIDYIKM LDAQGNCGRK SVSIYPDGSV
KPCQFVDWVS LGNVREKPLR EILNPENPEL KPFLEIERHL RGPRCSKCPF RRICGGGSRG
RALEFYGDEW GDDPLCFIDP IEIAKKRGID PAAIV
//
