ID A0A0P0CDH7_9BACT Unreviewed; 257 AA.
AC A0A0P0CDH7;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=IclR family transcriptional regulator {ECO:0000313|EMBL:ALJ01743.1};
GN ORFNames=DC20_22160 {ECO:0000313|EMBL:ALJ01743.1};
OS Rufibacter tibetensis.
OG Plasmid 1 {ECO:0000313|EMBL:ALJ01743.1, ECO:0000313|Proteomes:UP000061382}.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae;
OC Rufibacter.
OX NCBI_TaxID=512763 {ECO:0000313|EMBL:ALJ01743.1, ECO:0000313|Proteomes:UP000061382};
RN [1] {ECO:0000313|EMBL:ALJ01743.1, ECO:0000313|Proteomes:UP000061382}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1351 {ECO:0000313|EMBL:ALJ01743.1,
RC ECO:0000313|Proteomes:UP000061382};
RC PLASMID=1 {ECO:0000313|EMBL:ALJ01743.1,
RC ECO:0000313|Proteomes:UP000061382};
RA Dai J.;
RT "Complete genome sequence of Rufibacter tibetensis strain 1351t, a
RT radiation-resistant bacterium from tibet plateau.";
RL Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP012644; ALJ01743.1; -; Genomic_DNA.
DR RefSeq; WP_062546218.1; NZ_CP012644.1.
DR AlphaFoldDB; A0A0P0CDH7; -.
DR KEGG; rti:DC20_22160; -.
DR PATRIC; fig|512763.3.peg.4884; -.
DR OrthoDB; 9791752at2; -.
DR Proteomes; UP000061382; Plasmid 1.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF7; HTH-TYPE TRANSCRIPTIONAL REGULATOR XYNR-RELATED; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:ALJ01743.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000061382};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..74
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 75..257
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 257 AA; 28696 MW; F517B43102F4AFC0 CRC64;
MTEIEKATKY QAPALEKGLD ILEYLSLKAM PLSQTEIATG ISRKSNEIFR MLVCLEARGY
IIREEISGKY KLSLKIYNLS HRHSPVDDIR TAAQYPMYEL AGVLKQSCHL SVLYHSQLMV
IHQSKSPSPI SLSIEEGSLF PLVLTASGKV FLSFMSEEEQ NNVLKSNDVF KKYSKLQQKE
LTESLSKIKE TGYYIEASNL SKGVTDIVVP IGNMETGIVA VLAVSMLTTE YNEGLSLEDI
IMEVQSCAGK ILQRIGF
//