ID A0A0P1FE48_9RHOB Unreviewed; 463 AA.
AC A0A0P1FE48;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Putative HTH-type transcriptional regulator YjiR {ECO:0000313|EMBL:CUH53107.1};
GN Name=yjiR {ECO:0000313|EMBL:CUH53107.1};
GN ORFNames=SHM7688_02559 {ECO:0000313|EMBL:CUH53107.1};
OS Shimia marina.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae.
OX NCBI_TaxID=321267 {ECO:0000313|EMBL:CUH53107.1, ECO:0000313|Proteomes:UP000054823};
RN [1] {ECO:0000313|EMBL:CUH53107.1, ECO:0000313|Proteomes:UP000054823}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CECT 7688 {ECO:0000313|EMBL:CUH53107.1,
RC ECO:0000313|Proteomes:UP000054823};
RG Swine Surveillance;
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the class-I
CC pyridoxal-phosphate-dependent aminotransferase family.
CC {ECO:0000256|ARBA:ARBA00005384}.
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DR EMBL; CYPW01000025; CUH53107.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0P1FE48; -.
DR STRING; 321267.SHM7688_02559; -.
DR OrthoDB; 9804020at2; -.
DR Proteomes; UP000054823; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0009058; P:biosynthetic process; IEA:InterPro.
DR CDD; cd00609; AAT_like; 1.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR004839; Aminotransferase_I/II.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR46577; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR PANTHER; PTHR46577:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR Pfam; PF00155; Aminotran_1_2; 1.
DR Pfam; PF00392; GntR; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898};
KW Reference proteome {ECO:0000313|Proteomes:UP000054823};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 15..83
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 463 AA; 50617 MW; CE554C3C3C3A0DC1 CRC64;
MTGTIWPPDF ENCTDPKYLV LVQSLRCAVR SGHLAVGEKL PPVRDLAWQL GITPGTVARA
YKLAVEEGLL ETTVGRGTFV ADGRLEPMLG PEPLVTLSQS EDVDLRAVRV PDVGQDKAIH
GAMARVLAAE PSYLLCPDSV TDLVARQAVV NWIGHDIAAR LSIDDVVLTL GAQNASMIAM
QCCLHGSSPV VLTEEVTFPG VRHACRLLRA DVIGVGIDQD GLRPDRLEEA LRRHGAQVLV
TSAQAHSPTT VHTPLARRQE IAELARRYNL QIIEDDCYGL NASETPSYRM LCPDRAWYLG
SLTKAVSSAL RFGFLVPPEG RAQMARHVMQ SNCYGVPQPM LDICAELILS GEAAAIRQKV
IAAIEKRVRV AVNILGSWDI RWRRDVPFIW LKLPQGWRGS TFVRACDARG IRIKSADEYA
LPDGQAPNAV RIALAPELPV ADLQAALEIV SELLAKPPLW NEN
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