ID A0A0P5IV70_9CRUS Unreviewed; 809 AA.
AC A0A0P5IV70;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 28-JUN-2023, entry version 25.
DE RecName: Full=Nuclear cap-binding protein subunit 1 {ECO:0000256|ARBA:ARBA00019879};
DE AltName: Full=80 kDa nuclear cap-binding protein {ECO:0000256|ARBA:ARBA00030965};
GN ORFNames=APZ42_011579 {ECO:0000313|EMBL:KZS21632.1};
OS Daphnia magna.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=35525 {ECO:0000313|EMBL:JAK42937.1};
RN [1] {ECO:0000313|EMBL:JAJ30029.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D., Podicheti R., Orsini L., Colbourne J., Pfrender M.;
RT "Daphnia magna gene sets from two clonal populations assembled and
RT annotated with EvidentialGene.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:JAK42937.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D.G.;
RT "EvidentialGene: Evidence-directed Construction of Complete mRNA
RT Transcriptomes without Genomes.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:JAJ30029.1}
RP NUCLEOTIDE SEQUENCE.
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:KZS21632.1, ECO:0000313|Proteomes:UP000076858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Xinb3 {ECO:0000313|EMBL:KZS21632.1,
RC ECO:0000313|Proteomes:UP000076858};
RC TISSUE=Complete organism {ECO:0000313|EMBL:KZS21632.1};
RA Gilbert D.G., Choi J.-H., Mockaitis K., Colbourne J., Pfrender M.;
RT "EvidentialGene: Evidence-directed Construction of Genes on Genomes.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Component of the nuclear cap-binding complex (CBC), a
CC heterodimer composed of Cbp80 and Cbp20 that interacts with m7GpppG-
CC capped RNA. {ECO:0000256|ARBA:ARBA00011361}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NCBP1 family.
CC {ECO:0000256|ARBA:ARBA00007413}.
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DR EMBL; GDIP01193373; JAJ30029.1; -; Transcribed_RNA.
DR EMBL; GDIQ01247427; JAK04298.1; -; Transcribed_RNA.
DR EMBL; GDIQ01208788; JAK42937.1; -; Transcribed_RNA.
DR EMBL; GDIP01053303; JAM50412.1; -; Transcribed_RNA.
DR EMBL; LRGB01000024; KZS21632.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0P5IV70; -.
DR STRING; 35525.A0A0P5IV70; -.
DR Proteomes; UP000076858; Unassembled WGS sequence.
DR GO; GO:0005846; C:nuclear cap binding complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000339; F:RNA cap binding; IEA:InterPro.
DR GO; GO:0006370; P:7-methylguanosine mRNA capping; IEA:UniProtKB-KW.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 3: Inferred from homology;
KW mRNA capping {ECO:0000256|ARBA:ARBA00023042};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000076858}.
FT DOMAIN 28..240
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT REGION 667..717
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 809 AA; 94628 MW; F832F5BC879B8C80 CRC64;
MSRRKRDDGY EHGYRKRRRV VSEQAEIEDR LESLIIRVGD KTSSSLESNL EGLASVLEAD
MNTYKSKILR ILSECPIQMP EKCTIYSTLV GLLNAKNYNF GGEFVEQMVR NLKEALREGQ
WESARLIVRF ISDMVNCHIV SASSLLQLYD SFIDAAMEQG VPQVRRDWYM YALLTALPWV
GRELFEKKEN DLERIMAAME GYLRRRNTAH VAALRVWNCD TPHPQEEYLE CIWAQVRKLR
TDEWQERHIY RPYLAFDSIL SEALQHNLPV ILPPPHTAST QYPLPWVVFR MFDYTDCPEA
GPLLPGTHSV ERYLIEEHLH QIVTRHHNER KELATQLLAF PQRNKIPLEY MIVEVLFSEL
FNMPSPRYLE ISYGCTLIEL CKLQPSTMPQ VLAQATELLY ERIDTMNATC FDRFVSWFSY
HLSNFQFRWS WDDWQNCLSL EKDHPKAKFV SEVFGKCLRL SYYKRVNEMV PECYSPLLPP
KPEPYFKYQT EGGNGLPGAT QVQALTELLR KKPTPEEVLE LIQQLPNPLK DDDGDMEPSH
NPLAIEVFVQ TLLHLGSKSF THTFAGLAKY HSVFKTICEN EEAQICMLRQ VYELWQNHPQ
FLGVVVDKML KTQIVECCAV ANWIFSRDMA PEFTRSYIWE ILHLTIRKMN KHVVRLEKEV
ADARAKLRAA PSDSESSDDD PNREAGEKRR RTVSNKDTPK DGEEQPTEEM VERMEERLEA
AQSDQKNLFL IVFQRFIMIL SEHVVRCDTD GKDFNTFWYQ WTVGRLQQVF MAHHEQVEKY
SQTLETLLFT HDLDSNILDT FRQFQALRS
//
