ID A0A0Q4ISC5_9SPHN Unreviewed; 735 AA.
AC A0A0Q4ISC5;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Type II secretion system protein GspD {ECO:0000313|EMBL:KQN00693.1};
GN ORFNames=ASE85_08575 {ECO:0000313|EMBL:KQN00693.1};
OS Sphingobium sp. Leaf26.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1735693 {ECO:0000313|EMBL:KQN00693.1, ECO:0000313|Proteomes:UP000051336};
RN [1] {ECO:0000313|Proteomes:UP000051336}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf26 {ECO:0000313|Proteomes:UP000051336};
RA Garrido-Oter R., Mueller D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000051336}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf26 {ECO:0000313|Proteomes:UP000051336};
RA Vorholt J.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|RuleBase:RU004004}.
CC -!- SIMILARITY: Belongs to the bacterial secretin family. GSP D subfamily.
CC {ECO:0000256|ARBA:ARBA00006980}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQN00693.1}.
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DR EMBL; LMKV01000023; KQN00693.1; -; Genomic_DNA.
DR RefSeq; WP_056689567.1; NZ_LMKV01000023.1.
DR AlphaFoldDB; A0A0Q4ISC5; -.
DR STRING; 1735693.ASE85_08575; -.
DR OrthoDB; 9775455at2; -.
DR Proteomes; UP000051336; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015627; C:type II protein secretion system complex; IEA:InterPro.
DR GO; GO:0015628; P:protein secretion by the type II secretion system; IEA:InterPro.
DR Gene3D; 3.30.1370.120; -; 3.
DR InterPro; IPR049371; GspD-like_N0.
DR InterPro; IPR001775; GspD/PilQ.
DR InterPro; IPR005644; NolW-like.
DR InterPro; IPR038591; NolW-like_sf.
DR InterPro; IPR004846; T2SS/T3SS_dom.
DR InterPro; IPR013356; T2SS_GspD.
DR NCBIfam; TIGR02517; type_II_gspD; 1.
DR PANTHER; PTHR30332; PROBABLE GENERAL SECRETION PATHWAY PROTEIN D; 1.
DR PANTHER; PTHR30332:SF27; SECRETIN GSPD-RELATED; 1.
DR Pfam; PF00263; Secretin; 1.
DR Pfam; PF03958; Secretin_N; 3.
DR Pfam; PF21305; type_II_gspD_N0; 1.
DR PRINTS; PR00811; BCTERIALGSPD.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00022452};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|RuleBase:RU004004}.
FT SIGNAL 1..25
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 26..735
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5006221943"
FT DOMAIN 29..99
FT /note="GspD-like N0"
FT /evidence="ECO:0000259|Pfam:PF21305"
FT DOMAIN 123..181
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 185..254
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 260..364
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 482..646
FT /note="Type II/III secretion system secretin-like"
FT /evidence="ECO:0000259|Pfam:PF00263"
FT REGION 716..735
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 735 AA; 76722 MW; 6F8D90D59A1A7DF0 CRC64;
MTRKLLLSAA TALALATPIA APLMAQQTLN VRDADIRAFI QDAARVTGRT FIIDNKVQGK
VSVVTDRPLS RSEYFEIVLS TLRANGLVAV PAPGGAYRIQ PADGAAGQPS SVGRAASRNS
FVTEVFRLRS IDAASALETL RPLVSKEGSV TANRAGNSVV VADYADNIAR IRQVIARIDR
DTAATQMVML KNAGAREIAT SLQALVASGG GENAAPSAAT VVPIDSSNAV AIRGDANTVA
RLVAMARQLD QQAASGTEIR VYWLEHADAE KLLPVLQQLV GQSTSQPVTA STPAAGGAAP
ASQAAAPVAA ASSSSSSSGG GISTRGPAIV TRYEGANAII VAANSDVQRM LGETIRQVDT
RREQVLVEAI IVEISDAAAK KLGVQFLLGS TSTGFAATNY SNASPNLLTL AGAYGATQLG
TTTTTVVAPD GTKTTTEMQN SGDLASSLQE AALSSLTSAT GAIAGLGGSI GKNGIFGAII
NAVKSDTESN LLSTPSVMTL DNQKASILVG QQVPVTTGEA LSQNFDNQFR TVQRQDVGIK
LEVKPQINTG GAIKLFLKQE VSSVAGPVSN SSSDLIINKR EIETTVTVDD GEILALGGLL
DDNERKTIER IPLLSDIPGL GELFKSRSRS RTKTNLMVFI RPTILRSKED AQRLTQQRYG
YVRGMQLQRN PDMEPTIDEL VRDYMGATPP VAAQPGDAVV QPEVGAAPAQ VIEPSVRQSS
GVVRPVEIPA SGERK
//
