ID A0A0Q4YCR5_9BURK Unreviewed; 347 AA.
AC A0A0Q4YCR5;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=LacI family transcriptional regulator {ECO:0000313|EMBL:KQP17792.1};
GN ORFNames=ASF43_07920 {ECO:0000313|EMBL:KQP17792.1};
OS Pseudorhodoferax sp. Leaf267.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae.
OX NCBI_TaxID=1736316 {ECO:0000313|EMBL:KQP17792.1, ECO:0000313|Proteomes:UP000051560};
RN [1] {ECO:0000313|EMBL:KQP17792.1, ECO:0000313|Proteomes:UP000051560}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf267 {ECO:0000313|EMBL:KQP17792.1,
RC ECO:0000313|Proteomes:UP000051560};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQP17792.1, ECO:0000313|Proteomes:UP000051560}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf267 {ECO:0000313|EMBL:KQP17792.1,
RC ECO:0000313|Proteomes:UP000051560};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQP17792.1}.
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DR EMBL; LMMV01000012; KQP17792.1; -; Genomic_DNA.
DR RefSeq; WP_056181550.1; NZ_LMMV01000012.1.
DR AlphaFoldDB; A0A0Q4YCR5; -.
DR STRING; 1736316.ASF43_07920; -.
DR OrthoDB; 9805774at2; -.
DR Proteomes; UP000051560; Unassembled WGS sequence.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06307; PBP1_sugar_binding; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR46847; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR PANTHER; PTHR46847:SF1; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000051560}.
FT DOMAIN 7..61
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 347 AA; 37291 MW; BA01F1D7B98FD779 CRC64;
MESSKSPRIP DIARLAGVST ATVDRVLNQR AGVRAGTQQR VLQAAAELGY AELPAAPALA
SRAAPKPMRL SFLLPAGHNR FIRMLGDMVG YSQEHWTPWN VRCKTEFIES FDPQALAAAL
RRHGQRADGI ALMALEHPAV REAVHELVAA GVPVVTLISD LSNSPRTAYL GLDNRAAGRT
AGYLIGRFIG PRAAKVALIA GSRSYRAHEE REAGFLHVLS EMFGQLEVVG LREGHDDSEQ
NFAQTASLLE QHPLLAGIYN IGGASDGVAR ALKEAGRDQK VVLIGHGLTP DTRALLIDGS
MDAVITQSPQ ATLANAVRIF VNVREGRPAL AGVESTRSQV IFRENLP
//
