ID A0A0Q5VIA2_9ACTN Unreviewed; 411 AA.
AC A0A0Q5VIA2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=3'-5' exonuclease {ECO:0000313|EMBL:KQS56846.1};
GN ORFNames=ASG36_17640 {ECO:0000313|EMBL:KQS56846.1};
OS Geodermatophilus sp. Leaf369.
OC Bacteria; Actinomycetota; Actinomycetes; Geodermatophilales;
OC Geodermatophilaceae; Geodermatophilus.
OX NCBI_TaxID=1736354 {ECO:0000313|EMBL:KQS56846.1, ECO:0000313|Proteomes:UP000051830};
RN [1] {ECO:0000313|EMBL:KQS56846.1, ECO:0000313|Proteomes:UP000051830}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf369 {ECO:0000313|EMBL:KQS56846.1,
RC ECO:0000313|Proteomes:UP000051830};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQS56846.1, ECO:0000313|Proteomes:UP000051830}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf369 {ECO:0000313|EMBL:KQS56846.1,
RC ECO:0000313|Proteomes:UP000051830};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQS56846.1}.
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DR EMBL; LMQA01000004; KQS56846.1; -; Genomic_DNA.
DR RefSeq; WP_055766968.1; NZ_LMQA01000004.1.
DR AlphaFoldDB; A0A0Q5VIA2; -.
DR STRING; 1736354.ASG36_17640; -.
DR OrthoDB; 144122at2; -.
DR Proteomes; UP000051830; Unassembled WGS sequence.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR041605; Exo_C.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF18305; DNA_pol_A_exoN; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000313|EMBL:KQS56846.1};
KW Hydrolase {ECO:0000313|EMBL:KQS56846.1};
KW Nuclease {ECO:0000313|EMBL:KQS56846.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000051830}.
FT DOMAIN 232..312
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
SQ SEQUENCE 411 AA; 43772 MW; E63F5726D84DBF49 CRC64;
MSEETVTPVE EPESTAVPLL APRDGLTPVI ETSTALVGYA GALAAGSGPV AVDAERASGY
RYGQKAYLVQ LRRAGAGTGL IDPVPLPDLS PVQQAIGDAE WVLHAANQDL PCLAEIGLVP
TRLFDTELAA RLTGQPRVGL GAVVESLLGF SLQKGHSAAD WSTRPLPADW LVYAALDVEV
LVDLRDALAA ILEEQGKTEW ARQEFAAILA AGPAAPRVDP WRRTSGMHGL RSRRQLAVLR
ALWEARDLLA RRRDVAPGRV LPDSAIVAAV AADPKSDAEL SDLPVFRGRA NRKLASTWYA
ALQKGRAVPD GDLPPHSLPG DGPPPVNRWA DRDPAAHKRL QAARAGLAAL AEQWTVPVEN
LLTPDLVRRL MWSPPAEVTP EAVAAFLREG GARPWQVGLT VDPLTEAATT A
//
