ID A0A0Q5ZAD4_9BURK Unreviewed; 194 AA.
AC A0A0Q5ZAD4;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=HTH-type transcriptional regulator {ECO:0000256|PIRNR:PIRNR006707};
GN ORFNames=ASG30_04260 {ECO:0000313|EMBL:KQT11115.1};
OS Ramlibacter sp. Leaf400.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Ramlibacter.
OX NCBI_TaxID=1736365 {ECO:0000313|EMBL:KQT11115.1, ECO:0000313|Proteomes:UP000051173};
RN [1] {ECO:0000313|EMBL:KQT11115.1, ECO:0000313|Proteomes:UP000051173}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf400 {ECO:0000313|EMBL:KQT11115.1,
RC ECO:0000313|Proteomes:UP000051173};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQT11115.1, ECO:0000313|Proteomes:UP000051173}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf400 {ECO:0000313|EMBL:KQT11115.1,
RC ECO:0000313|Proteomes:UP000051173};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the GbsR family.
CC {ECO:0000256|PIRNR:PIRNR006707}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQT11115.1}.
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DR EMBL; LMQL01000009; KQT11115.1; -; Genomic_DNA.
DR RefSeq; WP_055894852.1; NZ_LMQL01000009.1.
DR AlphaFoldDB; A0A0Q5ZAD4; -.
DR STRING; 1736365.ASG30_04260; -.
DR OrthoDB; 9792628at2; -.
DR Proteomes; UP000051173; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR000835; HTH_MarR-typ.
DR InterPro; IPR026282; MJ1563.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR38465; HTH-TYPE TRANSCRIPTIONAL REGULATOR MJ1563-RELATED; 1.
DR PANTHER; PTHR38465:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR YVAV-RELATED; 1.
DR Pfam; PF12802; MarR_2; 1.
DR PIRSF; PIRSF006707; MJ1563; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PIRNR:PIRNR006707};
KW Reference proteome {ECO:0000313|Proteomes:UP000051173};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|PIRNR:PIRNR006707};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|PIRNR:PIRNR006707}.
FT DOMAIN 26..85
FT /note="HTH marR-type"
FT /evidence="ECO:0000259|Pfam:PF12802"
SQ SEQUENCE 194 AA; 22589 MW; 1ADBEC14F6FCB25C CRC64;
MPLQDHLPPL SREFVSHFGE MGSRWGINRT VGQIYALIFI SQRALNADEI AEALEFSRSN
VSMGLKELQS WRLVRLKHLP GDRREYFEAP GDVWEIFRVL AEERRRREIE PTLSMLRMAM
LQQPVNDADR HAQERMRQMH DLIDRLMTWF DDVQKLAPET AMQLMGMGAT VTRVLEFKDR
MTGKGASQTK KTES
//