ID A0A0Q6VTW9_9BURK Unreviewed; 909 AA.
AC A0A0Q6VTW9;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Diguanylate cyclase {ECO:0008006|Google:ProtNLM};
GN ORFNames=ASD15_10005 {ECO:0000313|EMBL:KQV82363.1};
OS Massilia sp. Root351.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Telluria group; Massilia.
OX NCBI_TaxID=1736522 {ECO:0000313|EMBL:KQV82363.1, ECO:0000313|Proteomes:UP000051876};
RN [1] {ECO:0000313|EMBL:KQV82363.1, ECO:0000313|Proteomes:UP000051876}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root351 {ECO:0000313|EMBL:KQV82363.1,
RC ECO:0000313|Proteomes:UP000051876};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQV82363.1, ECO:0000313|Proteomes:UP000051876}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root351 {ECO:0000313|EMBL:KQV82363.1,
RC ECO:0000313|Proteomes:UP000051876};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQV82363.1}.
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DR EMBL; LMDJ01000023; KQV82363.1; -; Genomic_DNA.
DR RefSeq; WP_057156479.1; NZ_LMDJ01000023.1.
DR AlphaFoldDB; A0A0Q6VTW9; -.
DR Proteomes; UP000051876; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR CDD; cd12914; PDC1_DGC_like; 1.
DR CDD; cd12912; PDC2_MCP_like; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 4.
DR InterPro; IPR033479; dCache_1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 3.
DR PANTHER; PTHR46663; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR PANTHER; PTHR46663:SF2; GGDEF DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02743; dCache_1; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08448; PAS_4; 2.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50885; HAMP; 1.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000051876};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..24
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 278..297
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 298..351
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 356..409
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 491..561
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 770..907
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 909 AA; 99118 MW; 352137A98F21BC46 CRC64;
MTTVVILLVL AATTIVTTVA LMLAERDMKA VIGAQQYAVL STAASYVDEQ LEAKRALLST
LPEGLPPGIH SDPAALQALL LARPAVGAEF FNVVAFDRSG KMVATMRPDL KEAGLSAAGA
PYFDNTVKSR AGLISAPFLS RLSGRPVVLM TQPVLDPRGE VAYVIAAGID LQQSDFFGPI
NGLKPGKTGF MFIMTASGIL LHHPTPERLL RNINDRPGYN RATEMALNGF EGWTEAKNKD
GNEGIYSYKR LKATNWIVAA RYPTDEAFAP LIELRKRAIL AASVFAAVAG LVAWLAIDRL
LAPLERLRSQ VALLRRGGTD LASLRTGRQD EIGELSEAFY QLTAERAATQ ERVLASESLV
RSILEHAPDA FVSTGPDGTV TEWNAQAEQT FGWRRDEAVG RNVAELIVPP RLRSAHALGI
MRLAAGRSAP DGLPRQRRLQ RTRIAAQHRD GHEIPVELSI GSLRHDSGMI ATAFLHDISE
RVAHEEQLAA SEHRARMIAD SMPALVAYLD RDLRYRFTNE HYQVLLGMDP DAMLGKSVSE
VFGPAVYLNW KDKMDAALRG ERVHEERDGV QLGRALHLMT DLVPDVDAAG QVQGIYAMSM
DITQRRNAEL TQAASEQRLQ LITDHLPALI SYIDRGHALR FGNATFQHWL GLDPASLAGR
PLREVMGAAA YGKTLPQLAR AFAGQRVCFE HRARLHGDLR TLETTFVPDV RADGSVAGVY
ALTQDMSRIK AVEQQLIELA RVDALTGIAN RRKFEEVLQQ AMARSQRLAR RMALAYLDID
HFKAINDSLG HGAGDDVLKE FASRLIQSVR AVDLVARLAG DEFIIVLENV DQGGEAAQLA
AKIVAAVRTP FTVNGSPMQV TTSIGVALYK GGGEGVGETA SSLIARADRA LYEAKRNGRD
CYVVDAEQS
//
