ID A0A0Q7DP89_9CAUL Unreviewed; 476 AA.
AC A0A0Q7DP89;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=DNA-binding protein {ECO:0000313|EMBL:KQW79567.1};
GN ORFNames=ASC65_13450 {ECO:0000313|EMBL:KQW79567.1};
OS Brevundimonas sp. Root1279.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Caulobacterales;
OC Caulobacteraceae; Brevundimonas.
OX NCBI_TaxID=1736443 {ECO:0000313|EMBL:KQW79567.1, ECO:0000313|Proteomes:UP000050923};
RN [1] {ECO:0000313|Proteomes:UP000050923}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root1279 {ECO:0000313|Proteomes:UP000050923};
RA Garrido-Oter R., Bai Y.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQW79567.1, ECO:0000313|Proteomes:UP000050923}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root1279 {ECO:0000313|EMBL:KQW79567.1,
RC ECO:0000313|Proteomes:UP000050923};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQW79567.1}.
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DR EMBL; LMEB01000009; KQW79567.1; -; Genomic_DNA.
DR RefSeq; WP_056454313.1; NZ_LMEB01000009.1.
DR AlphaFoldDB; A0A0Q7DP89; -.
DR STRING; 1736443.ASC65_13450; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000050923; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:KQW79567.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000050923};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 15..69
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 476 AA; 51806 MW; FD90A3413D1A3B4B CRC64;
MEIAADRKLF LGGRLKRLRR DLALTQTAMA ADLGVSPSYL NHIERNQRPV SAQLLLRLAE
TYDVDLRTLG QTSGPATEAE LAEAFADPLF QGLAVPRHEI VQLAEDQPAA ADALLRLYRA
FTDRRARDRA EADGAGGPGE GPADWVRDYV QGRRNHFPEL DLLGEALAAA LGEGSPGEPF
ETRAAARLQA LHGLTVRTLP AEVMVEWTRR FDPHRKRLLL SDALAPSSRA FAVAYQLVVS
EHEAEINGLV AAAAPPDEPT RRLLKVSLAN TLAAAVLMPY SAFQAAAEAS GYDLARLQAR
FGVSYEQAAH RLTTLSRPTA RGVPFFLMRV DQAGNISKRF ASGAFPFSRF GGACPRWRLH
AAFRTPGRVV TQIVETPDGG RWFTLARTVD RQGQDAFGEG QDLAIGLGCE LKHAHRLIYA
RGLDLAAPEV TPIGPACRLC HRHPCAERAA PPVDRPLAVD DWAKSVSPYP FATSQA
//
