ID A0A0Q7PQ05_9GAMM Unreviewed; 1504 AA.
AC A0A0Q7PQ05;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Diguanylate cyclase {ECO:0008006|Google:ProtNLM};
GN ORFNames=ASD14_14355 {ECO:0000313|EMBL:KQY49888.1};
OS Lysobacter sp. Root494.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Lysobacter.
OX NCBI_TaxID=1736549 {ECO:0000313|EMBL:KQY49888.1, ECO:0000313|Proteomes:UP000051738};
RN [1] {ECO:0000313|EMBL:KQY49888.1, ECO:0000313|Proteomes:UP000051738}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root494 {ECO:0000313|EMBL:KQY49888.1,
RC ECO:0000313|Proteomes:UP000051738};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQY49888.1, ECO:0000313|Proteomes:UP000051738}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root494 {ECO:0000313|EMBL:KQY49888.1,
RC ECO:0000313|Proteomes:UP000051738};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQY49888.1}.
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DR EMBL; LMFH01000008; KQY49888.1; -; Genomic_DNA.
DR RefSeq; WP_056135340.1; NZ_LMFH01000008.1.
DR STRING; 1736549.ASD14_14355; -.
DR OrthoDB; 197861at2; -.
DR Proteomes; UP000051738; Unassembled WGS sequence.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR011110; Reg_prop.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR011123; Y_Y_Y.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 2.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF07494; Reg_prop; 4.
DR Pfam; PF07495; Y_Y_Y; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF101898; NHL repeat; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000051738}.
FT DOMAIN 937..1007
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 1010..1062
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1094..1228
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 1237..1491
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 1504 AA; 167094 MW; 11BBAA6D1FB09299 CRC64;
MIAGLFGAVL APDAGALTRD YYFARLGSER GLGQNTVNAL AQDAQGFVWV ATQGGLHRYD
GQRYVQYRHD PRDPASLPDS YVTALAPEGD HSLWVGSYSQ YVARLNLATG EIRHYAVPDG
EQTQREVEAL LPHAGKVWVG TLAGLERLDP ETGTRDRVIT LDSRALRDAP RQSLVAGRDG
EVWYGTRTGL YRIGPRGGVE RIRPNMPIRA LAFDHRGQLW IGTMQGLYRL ASDGRSLLRV
WPAIGESAPE VRAIVEAPDH QLWISLSRQG VLRFDPANGH ALQLREQPGV TSGLPEDGIN
TLMIDQGGML WLGGDFRGVT VTDPLGTRFA YILNLDSGGH HNPATDDSVR AIAEDPSGAL
WLGTDDARLL RYDASADRFE DFTPRLPLPP GSDRARVMAL VREPAGNIWI GTMRGLMRLD
PRRGSIEPVA LGRYTDTPIR SLTLTRSGAL WIGTANNGAL RYSSDGEVLH YGHRDGDPHQ
LSHPAVHAVL EDRRGRIWLG TGDGLDVLDP ATGQLRHFRH DLNAPGSLPG NLVRTLWQAT
DGHIWVGTHA GLSRVIENGN GSIAFVHPLA DALHDRPVPV VYSMIEAPAG TLWLGTDNGL
TRFDVRNDRY RIYGMADGLQ DLEFNGGAAT ILGDGRLAFG GVRGLNVFDP RPLRDSPYLP
PLRLLSARIG SEASGNQGVL PQSGALSIPD GADLLRLRVG ALDYAPSADI QYRYRLEGFD
PMWIDNGRQQ DITYTRLPPG KYVLRVQATN RDGVWNPQEL RLPVQVLPPW WRHPRVIAFA
ALLLLSFVAV VAWRRHQQLR RERGLFEAIR EREQRLKLSL WGSGEVFWDY DLQRGEMHAM
RIDEHGMQDP DTAVQMEIVS EHEVHPEDLP RLREQLIQHL RGESPVLLSE HRVRLANGHW
AWMLARGRVV DRAQNGRALR IAGTARDVTA TRNADRERRI ASEVLRSMTE AVCVFDRDFS
FVSVNPAFTR MTGYSDVEVL GRDTSLLNSS QHDAEFYRQM RTRLERDGRW SGELWQQRKD
GQEFLCSVQA IVVLDASGQR SHYVGVLGDI TDQKRAEQEL RYLANYDTLT SLPNRTLLSE
RLSRAIVRAR RQGKRIAVLF LDLDRFKDIN DSLGHAAGDR ILRAAAARLQ STVGPQHTVA
RLGGDEFTVV LEDLDTIAEA EQVARRIIDA FSQPLDIDDR HDVSISPSIG ISLYPDHAQI
PTDLLKHSDT AMYQAKAAGR RTFMRYTDAM DVEIRQRATI SAALRKVLDR NELQLVFQPK
LSLAQMRITG VEALLRWHSP EYGEIPPDRF IPLAEESGLI LEIGEWAMQE ACATLQQWRE
QGLEDVSVAV NVSAMQLARG HLSDVVARAL AGRDIPPHRL QLELTETVIM ANAEQNAAML
QAIRDIGVGL AIDDFGTGYS SLSYLKRLPL TTLKIDKEFI GDLTRDADDE AITGAVIAMA
HSLGLTVVAE GVETEAQVKF LHDHGCDEIQ GYWLARPLRA DECATFLHSW ATAAAETGRQ
AVSG
//
