ID   A0A0Q8V1Q4_9MICO        Unreviewed;       398 AA.
AC   A0A0Q8V1Q4;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   SubName: Full=Ribonuclease D {ECO:0000313|EMBL:KRC51247.1};
GN   ORFNames=ASE16_10060 {ECO:0000313|EMBL:KRC51247.1};
OS   Leifsonia sp. Root227.
OC   Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC   Leifsonia.
OX   NCBI_TaxID=1736496 {ECO:0000313|EMBL:KRC51247.1, ECO:0000313|Proteomes:UP000051819};
RN   [1] {ECO:0000313|EMBL:KRC51247.1, ECO:0000313|Proteomes:UP000051819}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Root227 {ECO:0000313|EMBL:KRC51247.1,
RC   ECO:0000313|Proteomes:UP000051819};
RA   Gilbert D.G.;
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KRC51247.1, ECO:0000313|Proteomes:UP000051819}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Root227 {ECO:0000313|EMBL:KRC51247.1,
RC   ECO:0000313|Proteomes:UP000051819};
RA   Schulze-Lefert P.;
RT   "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL   Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRC51247.1}.
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DR   EMBL; LMIO01000002; KRC51247.1; -; Genomic_DNA.
DR   RefSeq; WP_055894258.1; NZ_LMIO01000002.1.
DR   AlphaFoldDB; A0A0Q8V1Q4; -.
DR   STRING; 1736496.ASE16_10060; -.
DR   OrthoDB; 144122at2; -.
DR   Proteomes; UP000051819; Unassembled WGS sequence.
DR   GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd06142; RNaseD_exo; 1.
DR   Gene3D; 1.10.150.80; HRDC domain; 2.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR041605; Exo_C.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR   PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF18305; DNA_pol_A_exoN; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000051819}.
FT   DOMAIN          209..289
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
SQ   SEQUENCE   398 AA;  43560 MW;  5440D91FDD059430 CRC64;
     MADHHVIATR DEYLEAVEAI AAGNGPVAVD AERASGFRYS QRAYLIQVFR RGSGTFLFDP
     PPIGRFDELN AAIADEEWVL HAATQDLTCL REVGLDPKHV FDTELAARLL GMPRVGLGTV
     VEELLGIHLA KEHSAADWST RPLPEPWLVY AALDVELLPD LRDAIAALLE EQGKTGIAQQ
     EFADELARDL KVVRSEPWRR LSGIHSIRGI RNLAVARELW LSRDELARTT DIAPGRLVPD
     ASLTAAAKAM PETKRGLAAL REFNGRASRT ELDRWWEAIE AGRTTEDLPV MRGNGDTLPP
     PRAWADRNPE ADARLKAARA AVTALSEELS IPIENLLTPE TLRRVAWAPP AEIDAASIAA
     ALAEWGARPW QIEATSQSIA QAFVEANQNG PETAEADS
//