ID A0A0Q9YL40_9COXI Unreviewed; 475 AA.
AC A0A0Q9YL40;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=HDOD domain protein {ECO:0000313|EMBL:KRG17668.1};
GN ORFNames=CC99x_02127 {ECO:0000313|EMBL:KRG17668.1};
OS Candidatus Berkiella cookevillensis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Legionellales; Coxiellaceae;
OC Berkiella.
OX NCBI_TaxID=437022 {ECO:0000313|EMBL:KRG17668.1, ECO:0000313|Proteomes:UP000051494};
RN [1] {ECO:0000313|EMBL:KRG17668.1, ECO:0000313|Proteomes:UP000051494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CC99 {ECO:0000313|EMBL:KRG17668.1,
RC ECO:0000313|Proteomes:UP000051494};
RA Mehari Y.T., Arivett B.A., Farone A.L., Gunderson J.H., Farone M.B.;
RT "Draft Genome Sequences of Two Novel Amoeba-resistant Intranuclear
RT Bacteria, Candidatus Berkiella cookevillensis and Candidatus Berkiella
RT aquae.";
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRG17668.1}.
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DR EMBL; LKHV01000013; KRG17668.1; -; Genomic_DNA.
DR RefSeq; WP_057625229.1; NZ_LKHV02000001.1.
DR AlphaFoldDB; A0A0Q9YL40; -.
DR STRING; 437022.CC99x_02127; -.
DR PATRIC; fig|1590042.3.peg.2176; -.
DR OrthoDB; 7001648at2; -.
DR Proteomes; UP000051494; Unassembled WGS sequence.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR CDD; cd04332; YbaK_like; 1.
DR Gene3D; 1.10.3210.10; Hypothetical protein af1432; 1.
DR Gene3D; 3.90.960.10; YbaK/aminoacyl-tRNA synthetase-associated domain; 1.
DR InterPro; IPR013976; HDOD.
DR InterPro; IPR014627; UCP036888_HDGYP-like.
DR InterPro; IPR036754; YbaK/aa-tRNA-synt-asso_dom_sf.
DR InterPro; IPR007214; YbaK/aa-tRNA-synth-assoc-dom.
DR PANTHER; PTHR33525; -; 1.
DR PANTHER; PTHR33525:SF3; RIBONUCLEASE Y; 1.
DR Pfam; PF08668; HDOD; 1.
DR Pfam; PF04073; tRNA_edit; 1.
DR PIRSF; PIRSF036888; HDGYPm_UCP036888; 1.
DR SUPFAM; SSF109604; HD-domain/PDEase-like; 1.
DR SUPFAM; SSF55826; YbaK/ProRS associated domain; 1.
DR PROSITE; PS51833; HDOD; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000051494}.
FT DOMAIN 204..404
FT /note="HDOD"
FT /evidence="ECO:0000259|PROSITE:PS51833"
FT COILED 442..469
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 475 AA; 53192 MW; 1436A46D16AB86BD CRC64;
MSDLSNTFSI TPESKARFRN IYEYLDGLAL SYEVIEHAET RSLEQAAQLC AIPRTELLRT
VILSEEHGAL MAILPCNRLL DFSVLCKTLN RDLAPAQYES LQLIFKECEA NSYPPLPDYF
EMDAILDKSI LSLEDVYFEP GNHHTLIKMT RQDFLSLLHN AWQGDFSAPI ASLTEMKENS
QLAAQINQFT PKRFENRLQE TIELPAVPPM ADKILQLRSD PNATAMNLAV IIEKDPSLAA
QLIKWAQSPY YGYSGKIISV ENAIIKVLGF DLVLNLALGL ALNRSMKVPL DGPLGLKAYW
KFSIYAATLI ENLIYEMPKA MRPIRGLAYL SGLLHNFGHL VLAELFPPQH FLLNRYLEVN
PEVSINEIEK HVLGVTHTQI GTWLLQNWGM PAEVLAAVKW HHEGDYSNEH AVYANLACIA
GRLLKRYNMG DATEDSLPPE ILGSLSMSAE QAEAALEKLL SKKDGLDSIV NQLSA
//
